| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0295 |
|---|
| Symbol | |
|---|
| ID | 5207230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 376618 |
|---|
| End bp | 377058 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640593921 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_001274677 |
|---|
| Protein GI | 148654472 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00767541 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0163104 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCT CTAGCAAAGG CGAATACGGT CTGCGCGCGC TGCTCGATCT GGCGCAGCGC
GTTGGCGAAG GACCCATTCA GAGCCACGAT ATCCACCTGC GTCAGGGGAT CGACGAAAAC
TACCTCAACC AGATACTGAT CCTGCTCCGT CGCGCCAGAT TGATCGAGAG CATTCGCGGT
CCGCAGGGCG GGCATCGCCT GGCGCGCCAT CCGTCACAGA TCACCGTCCT CGATGCCCTG
CTCGCTCTCG AAGGTCCGCT CCTGGCGGCT GACAGCGGGC GCGATGCGCC GACTCCGACT
GAGCCGATGG ATCGCGAACT GGTGCGCGAG GTCTGGGATG GGGCGCGTGA GATGCTCGAA
CGCTACCTGG CAAGCATTAC TCTCGAAGAC CTCTGCCAGC GCAAGGCGCA GCGTTCCGGG
AATGTGATGT ACTACATTTG A
|
|---|
| Protein sequence | MRISSKGEYG LRALLDLAQR VGEGPIQSHD IHLRQGIDEN YLNQILILLR RARLIESIRG
PQGGHRLARH PSQITVLDAL LALEGPLLAA DSGRDAPTPT EPMDRELVRE VWDGAREMLE
RYLASITLED LCQRKAQRSG NVMYYI
|
|---|
| |