Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0273 |
Symbol | |
ID | 5207208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 346256 |
End bp | 347299 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640593901 |
Product | hypothetical protein |
Protein accession | YP_001274657 |
Protein GI | 148654452 |
COG category | [S] Function unknown |
COG ID | [COG4804] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.214242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000101179 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCTAAAC AAAACGTGCA GCAGCCCGCC ACACCATTGC CTACCGGCTA TGCAGAACTG CTAGATAGCC TCAAATCACG CATTCGCCAG GCCCAGGTGC GCGCCGCCCT CTCGGTTAAT CGCGAGTTGG TGTTACTCTA CTGGCATATT GGCCGAGATA TTCTTCAGCG GCAAATACAG GAAGGCTGGG GCGCCAGAGT GATCGACCGC CTGGCGCAAG ACCTTGGACG TGAATTTCCA GAAATGAAGG GCGTTTCGCC GCGCAATCTC AAATACATGC GGGCGTTTGC CGAAGCCTGG ACCGATGAGC ACATTGTGCA AGAGGTGCTT GCACAAATTA CCTGGTATCA CAACATCACA CTGCTGGAGA AAGTCAAAGA CCCCGCCGAT CGGCTTTGGT ACGTCCAGCA GACCATCGAG CACGGCTGGA GCCGAAACGT GCTGGTGCAC CAAATCGAGA GCGGACTCTA CCAGCGGCAG GGAAAAGCAA TCACCAATTT TGATCGCACC TTGACTTCAC CCCAGTCAGA CCTGGCGCGC TCGCTCCTCA AAGACCCCTA CGTCTTCGAC TTTCTCTCGC TTAGACCCGA AGCGCAAGAG CACGACCTGG AGCGCGCCCT TTTGCACCAC CTGCGCGAAT TCTTGCTGGA GCTGGGCAAG GGGTTTGCTT TCGTTGGCGA ACAGTATCGC CTGGAAGTCG GTGGTGAAGA GTTCTATATC GACCTGTTGT TCTACCATTT GCGCCTTCGT TGCTATGTGG TCATCGAACT CAAGATCGGT GAATTCAAGC CAGAATATGC TGGCAAGGTG AATTTCTACC TCTCTGCAGT GGACGACCTA TTGCGCCATC CTGAAGACCG CCCCAGCATC GGACTCATTC TGTGCAAGAG TCAGAACCGA TTGGTGGTGG AGTATGCCTT GAGGGATATG AACAAGCCAA TGGGTGTTGC GACCTACCGC CTCACTGGCG CCTTGCCTGC CGACATGCAA GCGAGCCTGC CGAGCATCGA GGAACTGGAA AAGGAGTTGG GCTATGACGC TTGA
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Protein sequence | MAKQNVQQPA TPLPTGYAEL LDSLKSRIRQ AQVRAALSVN RELVLLYWHI GRDILQRQIQ EGWGARVIDR LAQDLGREFP EMKGVSPRNL KYMRAFAEAW TDEHIVQEVL AQITWYHNIT LLEKVKDPAD RLWYVQQTIE HGWSRNVLVH QIESGLYQRQ GKAITNFDRT LTSPQSDLAR SLLKDPYVFD FLSLRPEAQE HDLERALLHH LREFLLELGK GFAFVGEQYR LEVGGEEFYI DLLFYHLRLR CYVVIELKIG EFKPEYAGKV NFYLSAVDDL LRHPEDRPSI GLILCKSQNR LVVEYALRDM NKPMGVATYR LTGALPADMQ ASLPSIEELE KELGYDA
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