| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0256 |
|---|
| Symbol | |
|---|
| ID | 5207191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 326308 |
|---|
| End bp | 326673 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640593886 |
|---|
| Product | TraR/DksA family transcriptional regulator |
|---|
| Protein accession | YP_001274642 |
|---|
| Protein GI | 148654437 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1734] DnaK suppressor protein |
|---|
| TIGRFAM ID | [TIGR02419] phage/conjugal plasmid C-4 type zinc finger protein, TraR family
[TIGR02420] RNA polymerase-binding protein DksA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000917013 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0123355 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCGA CGACTATCTT CGCAGCACAA CGAGAGCGGC TCGAAGCGGA GCGCGATGCG
TTGCTCGCCG AGATCGCCGC GCTAGAGCGC GAGCGCGCCA GTCGAGAGGA AAGCGCCGGT
ATCGGGAATG TCGTTGCCGA AGAAATGATG GAAACATTGG TGCGCGAGCG CGACTTGGCG
CTGCGCAGCA ATGCGCGCGA GTTGCTGGAA CAGGTCAATG CTGCGCTGCG CCGTCTTGAT
GAAGGCACCT ACGGCATCTG CGCCGATTGC GGTGAACCGA TTCCGATCGA GCGTCTGGAA
GCGCTTCCGT ATGCGACACT GTGTGTGCGT TGCCAGTCGA CGCGTGAACG CGCCCGACGC
TGGTGA
|
|---|
| Protein sequence | MPSTTIFAAQ RERLEAERDA LLAEIAALER ERASREESAG IGNVVAEEMM ETLVRERDLA
LRSNARELLE QVNAALRRLD EGTYGICADC GEPIPIERLE ALPYATLCVR CQSTRERARR
W
|
|---|
| |