| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0254 |
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| Symbol | |
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| ID | 5207189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 324480 |
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| End bp | 325430 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640593884 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001274640 |
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| Protein GI | 148654435 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00128568 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0139126 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCTG AAGTGCTGCA TCTGGTGGTT GAAGCTGCCA ATGAAGGGGA TCGGCTAGAC
CGGTATGTCG CCGATCATGT GCCCGATCTC TCGCGCACCT ACGCTCAGCG CCTGATCGAA
GCCGCCCAGG TGCTTCTGAA CAATCGCCAG GCGCGCCCCA GCACTCCCGT TCATGCCGGC
GATACGGTCA CGGTGCACCT GCCTGCGCCG CAACCGGTCG GTCTCGTCGC CGAACCGCTC
CCACTCCAGA TTGTGTACGA GGATCGGGAC GTCGTCGTGA TCGATAAGCC AGCAAGCATG
GTTGTGCATC CTGCGCCCGG TCACGACCGT GGCACACTGG TCAATGCGCT CATTGCGCGC
TACCCGGAGA TGGCGATCAA TGGCGATATG CGCCCCGGCA TTGTGCATCG CCTGGATCGC
GATACGTCGG GGTTGCTGGT GGCAGCGCGC AATGAGCGCG CGCTGCGGTC GTTGCAGGCG
CAACAGCAGG CGCGCACCAT GCTGAAAATC TATCTCGCGG TCGTCGAGGG GCGGATGCCC
GAACTCGAAG GGGTGATCGA TGCACCAATC GCGCGCCATC CGACCGACCG GGTGCGCATG
GCGGTGGTTG CCGGCGGCAG ACCGGCGCGA ACTCACTGGC GCGTCCTCGA AGACCTGGGA
GAGTACACAC TGATCGAAGC GCGATTGGAG ACCGGACGCA CCCATCAGAT CCGGGTGCAC
TGTGCATCAC GCAACCGGCC CATCCTCGGC GATCCGCTGT ACGGTCCGAA GCGCCCGCGG
GCGACGTTCG GATTGACGCG CCAGTTTCTC CATGCGCATC GCCTTGGTTT CAAATTGCCA
TCCGGCGGCG AGTGGGTCGA GTTTACGTCG CCCCTGCCTG CCGATCTGGA AGCGGCGCTT
GCCAGGCTCC GCCAGAGCGC GCGCGCTGCG GTCAGGCGCG TGTCGTCATG A
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| Protein sequence | MSAEVLHLVV EAANEGDRLD RYVADHVPDL SRTYAQRLIE AAQVLLNNRQ ARPSTPVHAG
DTVTVHLPAP QPVGLVAEPL PLQIVYEDRD VVVIDKPASM VVHPAPGHDR GTLVNALIAR
YPEMAINGDM RPGIVHRLDR DTSGLLVAAR NERALRSLQA QQQARTMLKI YLAVVEGRMP
ELEGVIDAPI ARHPTDRVRM AVVAGGRPAR THWRVLEDLG EYTLIEARLE TGRTHQIRVH
CASRNRPILG DPLYGPKRPR ATFGLTRQFL HAHRLGFKLP SGGEWVEFTS PLPADLEAAL
ARLRQSARAA VRRVSS
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