| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0243 |
|---|
| Symbol | |
|---|
| ID | 5207178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 310276 |
|---|
| End bp | 312792 |
|---|
| Gene Length | 2517 bp |
|---|
| Protein Length | 838 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640593873 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001274629 |
|---|
| Protein GI | 148654424 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4745] Predicted membrane-bound mannosyltransferase |
|---|
| TIGRFAM ID | [TIGR03663] conserved hypothetical protein TIGR03663 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00700396 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATTG CCGAACTTCC GTCACGGGTC ACCGTAACGC CTGACGAGAG CACAATCCCC
GCAATGGCGC GCCCGCGTGC AGCGACGCTC ACGCTCGAAC AGGCTGCGTA TCTTGTTATC
CTCCTCCTGG CGCTGGTTTC GCGATTGTGG GGGTTGGGCG ACCGCGCACT GCATCACGAT
GAGACGCTGC ACGCCTTCTT TTCGTGGCTG ATCTTTCGTG GCGAAGGGTA TGTGCACGAT
CCGTTGCTCC ACGGTCCTTT CCTCTATTTC TTTGGGGCAT TGATCTATTT CCTCTTCAGC
GTCAGCGATG CCACGGCGCG CCTGGGTCCG GCGCTGTTCG GCGTGGCGCT GGTGATGATG
CCCTATCTGC TGCGGCGTGA GTTGGGACGT AGCGCGGCAC TGCTGGCATC GCTCTATCTC
CTGATCTCCC CCGCCTTCAT GTATATCGCG CGCTTCATCC GTCACGATCC GTACACGATT
CTGTTCGAGT TGCTGGCGCT TATCGGCGCG GTGCGCTATG CGACGACCAG ACGCCCGCTG
TGGCTGTATG TGATGGCCCT CGCACTGGCG TTGATGTTTG TGACGATGGA GACCTTCTTT
CTCTATCTTG CGATCTTTGT CCCGCCGGTT GCGCTGGCGT TGTTCTGGAA GGTGTGGAAG
CCAGGTGTGG CAGTTCTGGC GGCGCTGGGG ATCGCGGTCG TGGCGCTGGT GTTCTGGCTG
CCAGGATACC CGGAACGCCC GTTCCCGACC AGCGATACGG TCAATCGGGT TGCCGGACCG
TACATCTGCC CAAGTGAACT GCAACCCTTC CCCCCCCCCA ACCCGATGCG CGTCGCTCGC
CCCGGTCCGA TCTTTGGCTG GCCCCCGCTG GCGACGTTTG ACAACAATTA TGCGCTGTGC
GTCCGTCATC AACCGGACGA TAATTTCGGT CTCTACTTCA TCAAACTTGG CGAGTTCTTC
GGGCATCCGG CGATCCTGAC CGGGCTTGTG CTGGTCCCGA CAACGCTGGC GGCGCTCTGG
TGGATCGTCT GGCGACGGCG CGACACGACC GGCATGACCC GTTGGGAACG TGCGCGCGCG
AGCGGCGATC CGACGGTCGC GGTTTTTGCA AGTCTGGCGC AGGACCGGCG TCTGTTGATC
GCGGGCGGGC TTTTTTTTCT GATTTATACC CTGTTCTTCA CCGCATTTCT GACCAATACC
GCTGGCGTCA TCACCGGTAC GACCGGTTCG CTCCTCTACT GGCTGGCGCA GCACGAGGTT
GAACGTGGCG GTCAACCGCC GCACTACTAC GCGGTGCTGC TGGCGATCTA CGAGCCGCTG
CTGATCCTGT GGGGTCTGGC GGGTCTGATA ATGGTGGGAG CGCTGGGATG GCAACGGCGA
CGCCACACAC GCAACCGCGC CGATCCCGAC GCCGATGGAG ATGCCGCGCC TGGGCGCGCA
ACCCTTGACA CCGCCACCGC TCCTGGCGGC GCCACAGTGC TGCCGTTTGT CCTGGCGTGG
TGGAGTGTAG CTACATTTGC ACTCTACTCG TGGGCGGGCG AAAAGATGCC ATGGTTGACA
GTGCACGTCG CCCTGCCACT CACATTGCTG GGGGCGTGGG CTGCGGGGCG CACGCTGGAA
TGGTGGCGCC GCGCGGTCGA TGATGATGAA GCACGGGATG GATCGGTATT GAGCCAGATC
GCACGTCCAT TCCCGATCTT CCTGGGGGTG CTGACGGTCA TCAGCGCTTA TTGTCTGATC
CTGCTGAGCG TGACGATCAA CGACGCAACG ATCAACAGCA ATCCGCAACT TGCAGCACTC
ACGCCATGGA TCGCGCCACT CTGGATGATG CTGACCGCGC TGCTCACCGC CGGTGCGTGG
ATGCTACGCG GGCGACGCTG GGCGCTGGGG GCGCTCATGG CGGGGGTCAC GCTGATTGTA
GCGGTTTACA CGCTGCGCAG CGCGTATCAA CTCAGTTTCC GCTACGGCGA TGTGCCGCGG
GAGATGATGA TCTACACCCA GACGTCGCCT GATGTGAAGC GGGTGATCGA CCGGCTCGAC
GAGGCGCTGC GCCGGCGCAG CAACGCAACG ACCGCGACGG TCTGGTACGA TAACGAGACC
GTGTGGGACT GGTACCGCAT CCGTTTTGCC CGCACCGAGG AGCAACCGCC GCAACTCCGG
CGCGCTCCGG GCGACGATGT GATCGCCGTG CTTATGCTGC TCGAAAACTA CGAGAATGAG
CAGAATCGCC GTTTTCTGGA AGGGTTCGTG GTGCAACGCT ATCCGTTGCG CTGGTGGTTC
CCGGAAGAGG AAACGTATCG CCTGCCGCGC GACTGGAGGA CGGCCAAGGT GACCGAACGT
TCGTCACTCC TGATGCGTCT CCTGCGCCAG CCGTTCGATC CGGTCGTGTC GCGGCAGTTC
TGGAACTATA TCCTGTACCG CATCCCGCCG CATCCGCTCG GTTCGACCGA TTTTGTCATC
GCGGTGCGCC CCGAAGCGGC GCCTGAGATC GGGCTGGGTC TCGGCGGCGA GCGGTGA
|
|---|
| Protein sequence | MSIAELPSRV TVTPDESTIP AMARPRAATL TLEQAAYLVI LLLALVSRLW GLGDRALHHD
ETLHAFFSWL IFRGEGYVHD PLLHGPFLYF FGALIYFLFS VSDATARLGP ALFGVALVMM
PYLLRRELGR SAALLASLYL LISPAFMYIA RFIRHDPYTI LFELLALIGA VRYATTRRPL
WLYVMALALA LMFVTMETFF LYLAIFVPPV ALALFWKVWK PGVAVLAALG IAVVALVFWL
PGYPERPFPT SDTVNRVAGP YICPSELQPF PPPNPMRVAR PGPIFGWPPL ATFDNNYALC
VRHQPDDNFG LYFIKLGEFF GHPAILTGLV LVPTTLAALW WIVWRRRDTT GMTRWERARA
SGDPTVAVFA SLAQDRRLLI AGGLFFLIYT LFFTAFLTNT AGVITGTTGS LLYWLAQHEV
ERGGQPPHYY AVLLAIYEPL LILWGLAGLI MVGALGWQRR RHTRNRADPD ADGDAAPGRA
TLDTATAPGG ATVLPFVLAW WSVATFALYS WAGEKMPWLT VHVALPLTLL GAWAAGRTLE
WWRRAVDDDE ARDGSVLSQI ARPFPIFLGV LTVISAYCLI LLSVTINDAT INSNPQLAAL
TPWIAPLWMM LTALLTAGAW MLRGRRWALG ALMAGVTLIV AVYTLRSAYQ LSFRYGDVPR
EMMIYTQTSP DVKRVIDRLD EALRRRSNAT TATVWYDNET VWDWYRIRFA RTEEQPPQLR
RAPGDDVIAV LMLLENYENE QNRRFLEGFV VQRYPLRWWF PEEETYRLPR DWRTAKVTER
SSLLMRLLRQ PFDPVVSRQF WNYILYRIPP HPLGSTDFVI AVRPEAAPEI GLGLGGER
|
|---|
| |