| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0242 |
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| Symbol | |
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| ID | 5207177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 306778 |
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| End bp | 310218 |
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| Gene Length | 3441 bp |
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| Protein Length | 1146 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640593872 |
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| Product | NHL repeat-containing protein |
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| Protein accession | YP_001274628 |
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| Protein GI | 148654423 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4745] Predicted membrane-bound mannosyltransferase |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
[TIGR03663] conserved hypothetical protein TIGR03663 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00900908 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGATTC TTTCACGAGA TCCGCGCAGC GTCGCAGCTG CTCCCGGCGG GCTGGATCGC
CCGTTGAGCC TGGCATGGCT TTCGGTTGAT GTGCTGCTGT TCGCACTGCT CATTGTGGCG
AGCATCATTG CGCACCTGTA CGGGCTTGGA CGTATGGCGC TCCACCATGA CGAGTCGATC
CACGCCTGGA TGAGCTGGAA GTTCTACACC GGCGCTGGCG GCTTCGTCTG CTGGGGCGGG
CGTGTGTCGG CGACCTACTG CTACGATCCG GTGTATCACG GACCGTCGCT CTATGTGCTG
ACCCTTTTCT CCTATTTTCT GTTCGGCGAT GGCGACCTTC AGGCGCGGTT GCCGCAGGCG
CTCGCCGGGA TCGCGATGGT CGCTTCCGCC TGGATGTTGC GTCCCTACCT GGGCGCGCGC
GGCGCGTTGC TGGCGGGCGT GTTGCTGGCG TTCACGCCGA CGCTGCTGTA CTACACCCGC
TTTGCGCGCC ACGATGGGTT GATGGTGCTG TGGACGCTCT GGATCGTGAT CGGCTTCTTC
CGCTATATCG ATACGGCGCA ACCGCGGTAC CTGTACCTGC TGGCAGTCGG CATCGCGCTG
GCGCTGGCCA CCCACGAACT CTACTACATT CTGGGGTTCA TCTTCGGCTG GTTCCTCATC
ATCCGCGTGC TGTACGAACT GCTGCCGCGC CGCACCATGA CGATTGCCCT CGGTACAATC
GCCGTCGTCA CAGTGCTGAT CGAACTGAGC ATCATCAGCG GGTTGTGGTA CGGGCGCCTG
ACGCCGACGC TGCGCGCGGA TGGCATTTCG CTGCTCTTCT TCACGGTTGC CAGCGGTGGG
TTGATCATGT CGCGGGTGTG GGACCAGACG CCGTTGTTTG TTCCGCGACT CGTCGCGCTG
TGGCGCGAGC AACGCGCCCA TCTTTGGATT GCGCTTGGCG TGCTGGCAGC GATCTTTGTC
GTGCTCTACA GCACATTCTT CGCCGACATG CAGAGCGTGT TCGCCGGACT GTACGCTGGA
CTGGCGTACT GGCTCGGCTC GCAGCAGGAA TATGCACGCG GCGATCAACC GTGGTACTAC
TATCTGATGC TCATGTCGCT CTATGAGCCG CTGGCATTCT TCGGCGGGCT GGCAGCGACG
GTCTACCTCT TTACCCGCGG CGTGCGCCTG CGCCATCACC CTCAGGCCGT TGATGAACCA
TCGTCTGATG GCGTCGAAAC GCCCGATACG CCGCCGCGTG CGTCGGTCGA ATCGGCGCCG
GAGATGCACA CGTCGTTCGC CGGGCGTCCG GCGACGGCGC TGTTTCCACT GTTTCTGGCA
TTCTGGTTCC TCTGCTCATT TGTGGCATTC TCGTGGGCGG GCGAGAAGAT GCCCTGGCTC
AACTCGCACA TTGCGTTGCC CGCCAATCTG CTCCTGGCAT GGGCGCTGGC GCGACTGGGC
GCGAGCCTGA ACTGGCGAGA ACTCGACCGC CGCGCCTGGC TCGTGCCAGC AGCTGTATTC
CTGATCGTTA CTGCGATTGC AGTGGCGTTC TGGCGTTTCG GTCAGATGAG CGCCGGTCAG
CAAGGGCAGG CGAACCTGTT GCAGGGCATC CTGCTGCTTG GACTGATCGG CGGATTGATC
TACCTGATCG TCGTGGTTGC GCAGCGGATC GGCGCGCGCG CAACCCTGGC GCTGGGGGCG
CTCACCGTTG CGGCGCTCAT GGGCGCCTAT ACCCTGCGCG CCACATGGCT GGTGGTGTAC
GACCACCCCG ATACGCCGGT CGAACCGCTG ATCTATACCC AGAGCACACC CGACATCCCG
TTGATCGTCG CGCAGATCCG CGACCTGGCG ATCAGTCAGA CGCGCAATGC CAGGAGCGTG
AACGACCCGA CCGGCGGACT CTCGATGCCG ATCATTATGG ATACCGGCGA CCCTGCGCAG
GACGGGGAAG GGAGTCTTGC CTGGCCCTAC CAGTGGTATC TGCGCGATTT CAAGCGGATC
GAACTGCGCA ATTCGGACGC CTTCCGCGCT GCAACCCCCG AAACATTCCT GGTCGATCCG
CCGCAGGGCG CGGGGGAACG CATTCCAGCG CCGGTGGTGA TGGTGTCGCG GGTCAGCCTG
AACGAAACAG CGCGACAGGC GCTGGAAAAC GACTATGTGC GTCTGTACGA CACCAAACTG
AACTGGTGGT TCCCGGAAGG AAACAAGTGC GATCCGCAGA GTCCCGGCTA TAAGCGGTTC
TACTTCGCCT ATCCGGGCAG CCTGGGGGAT GTGAGCAAAG CATGCCCGAC GCTGCAACCG
CAGGATGTGC CGCCGGTATG GGCGCCGCTG CTCTGGATGT TCGACAGTTC GCACTGGGAG
AACACCAGGC GCTACCTGCT GTACCGCGAC CTGCCGCAAC CGCTGCGTCT CGACGGGCGC
GAGATGTCGG TGTGGGTGCG CCGCGACCTG GCGCGCGTCG GCGATGCGCC GGCTGTAGCT
GCCACCGGCA GCATCATCAG ACTGGTGGCG ACCGATATTT TCGGCGAGTT TGGGAACGCG
CCGGGGCAAC TGGTGCAACC ACGCGGCATT GCTATCGACC CGCAGGGGAA TATCATCGTT
TCGGACAGCG CCAACCATCG CCTGATCGTG TTCGATCCAT CCGGCACGCC GATCCGCACC
ATCGGCAGTT TCGGCAGCGG CGACGGTCAA TTCTACGAAC CGCGCGGCGT CGCCGTTGAC
GCTCAGGGGA ACATCTATGT CGCCGATACC TGGAATGCGC GCATCGTCAA ACTCGACCCG
CAGGGAACCT TCCTCGCCAG CTGGGGAGTC GGGCGTGACG ATTTCGGCGA TGGACGCCGC
GCTTCGCCAA CCGGCGGCAC GCAGGACGCG AACCTTGCCC GACCGCTCGA CCTGTTCGGT
CCGCGCGGCG TGGCCGTCGA CGCCGACGGG AACGTGTATA TCGCCGATAC CGGCAACAAA
CGGATCGTGG TCACCGACAC CGACGGCAAC TACCGCTATC AGTGGGGGTA CGACGGCAGC
GCATCGGGGC AGTTCAACGA ACCGACCGGC GTCGCCGTCG ATGAGAACGG CACCGTATTC
GTCGCCGACA CCTGGAACAG TCGGGTGCAG GCATTTGCGC GCGCCGACAA CGGGCAGGTC
AGCCCGCTGC CCTACGCCAT CTGGCGGGTG CCCGGCTGGC AACCGCAAAC CTACGATGAT
CCGTTCATCG CAGCGCAGGG CGGGCGGGTG CTGGTCAGCG TGCCGGCGCG CAACACCCTG
CTGCTGACCG ATGACAGCGG CGCGGGGTTG ATCTCCTGGG GTGGAACCGG CAGCGATGCC
GCTTCGGTCA ATCTACCGTG CGGCGTGGCA TTCGCGTCAG ATGGCTCGGT GCTGGTTGTG
GACCGCGGGA ACGTGCGGAT TATGCGCTTC AGCCTGCCGA ATGTTGCGCC ATCGGCGCCA
ACCGACGCAC CCCTGCGGTA G
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| Protein sequence | MAILSRDPRS VAAAPGGLDR PLSLAWLSVD VLLFALLIVA SIIAHLYGLG RMALHHDESI
HAWMSWKFYT GAGGFVCWGG RVSATYCYDP VYHGPSLYVL TLFSYFLFGD GDLQARLPQA
LAGIAMVASA WMLRPYLGAR GALLAGVLLA FTPTLLYYTR FARHDGLMVL WTLWIVIGFF
RYIDTAQPRY LYLLAVGIAL ALATHELYYI LGFIFGWFLI IRVLYELLPR RTMTIALGTI
AVVTVLIELS IISGLWYGRL TPTLRADGIS LLFFTVASGG LIMSRVWDQT PLFVPRLVAL
WREQRAHLWI ALGVLAAIFV VLYSTFFADM QSVFAGLYAG LAYWLGSQQE YARGDQPWYY
YLMLMSLYEP LAFFGGLAAT VYLFTRGVRL RHHPQAVDEP SSDGVETPDT PPRASVESAP
EMHTSFAGRP ATALFPLFLA FWFLCSFVAF SWAGEKMPWL NSHIALPANL LLAWALARLG
ASLNWRELDR RAWLVPAAVF LIVTAIAVAF WRFGQMSAGQ QGQANLLQGI LLLGLIGGLI
YLIVVVAQRI GARATLALGA LTVAALMGAY TLRATWLVVY DHPDTPVEPL IYTQSTPDIP
LIVAQIRDLA ISQTRNARSV NDPTGGLSMP IIMDTGDPAQ DGEGSLAWPY QWYLRDFKRI
ELRNSDAFRA ATPETFLVDP PQGAGERIPA PVVMVSRVSL NETARQALEN DYVRLYDTKL
NWWFPEGNKC DPQSPGYKRF YFAYPGSLGD VSKACPTLQP QDVPPVWAPL LWMFDSSHWE
NTRRYLLYRD LPQPLRLDGR EMSVWVRRDL ARVGDAPAVA ATGSIIRLVA TDIFGEFGNA
PGQLVQPRGI AIDPQGNIIV SDSANHRLIV FDPSGTPIRT IGSFGSGDGQ FYEPRGVAVD
AQGNIYVADT WNARIVKLDP QGTFLASWGV GRDDFGDGRR ASPTGGTQDA NLARPLDLFG
PRGVAVDADG NVYIADTGNK RIVVTDTDGN YRYQWGYDGS ASGQFNEPTG VAVDENGTVF
VADTWNSRVQ AFARADNGQV SPLPYAIWRV PGWQPQTYDD PFIAAQGGRV LVSVPARNTL
LLTDDSGAGL ISWGGTGSDA ASVNLPCGVA FASDGSVLVV DRGNVRIMRF SLPNVAPSAP
TDAPLR
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