Gene RoseRS_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0239 
Symbol 
ID5207174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp297127 
End bp300447 
Gene Length3321 bp 
Protein Length1106 aa 
Translation table11 
GC content64% 
IMG OID640593869 
Producthypothetical protein 
Protein accessionYP_001274625 
Protein GI148654420 
COG category[L] Replication, recombination and repair 
COG ID[COG1743] Adenine-specific DNA methylase containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00821808 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGACG ACCGCCGCTT CATCGAAGAA ACCTTCCCGG TCAAAGCCGT GAGCCAGCAC 
GCGGCGAAGG AGAAGAATAT TCGCCACGGG CACATCAGCA CGCTGCACAT CTGGTGGGCG
CGCCGCCCGC TGGCCGCCTC GCGCGCCACC GCATACGCCG CGCTCGTTCC GCCGCCCGCC
GACGCGCTCG CCTGGCAGAC GCAGAGCGAG TTCATCGCCG ACCTGAGCCG CTGGGAGCGT
GCGCTGGACG CCCCGCTGCT GCAACGCGCC CGCCGCGCGA TCTACGCCGC CCACGCCGAA
CGGTTGAGCG CCGAACTGGG GCGTCCCGTC TGTGTGGACG ACATCGAAGC CGGGCGCGTC
CCGCCGCCGC GCATCCTCGA CCCGTTCGCA GGCGGCGGCT CCTATCCGCT CGAAGCCCTG
CGCCTGGGAT GCGACGCTTA CGCCAACGAC TATAACCCGG TCGCCGCGCT GATCCTCAAA
GCCACCCTGG AGTACCCGCA GCGGTTTGGT GGGAACGGAT TGGGGAAGAG AACACGGATC
GACACGGATG GGACGGATCG GCACGGATTC AAGAAAAATA TCCGTGACCA TCCGTCTGAT
CCGTGCCAAT CCGTGGTTCA TACCGATCCG TGTCAATCCG TGGTTCATCC CGAAAGCTTC
GGGCAGACGG AGATGTTCAG CCGGGATGCG CCGGGCAACC CCCTGCTGGC GGCGGTGAAG
CAGTGGGGGG AATGGGTGCT GAACGAGGCG CGCAAAGAAC TGGCGCCGTT CTACCCGTCG
TCCGGCGCTG CCACCGTCGT CGGCTACATC TGGGCGCGCA CGCTCCCCTG CCAGAACCCG
TCCTGCGGCG TTGACATCCC GCTCATGCGC CAGTTCTGGC TGGCAAAAAA AGACAGGAAA
CAAGTTGCGC TTTGTATTGT GAAGAGAACA CAGATCGACA CGGATGTGGG GAATAGAACA
CGGATACACA CGGATGTAAC GGGTGAACAC GGATTGGGGA ATAGAACACG GATACACACG
GATGTAACGG ATGAACACGG ATTAAGGAAT AAAAATATCC GTGAACATCC GTCTGATCCG
TGCCAATCCG TGGTTCATTC TGACTCTGTG TCTGAATCGT GCCAATCCGT GGTTAATTTG
AATAGAACAC GGATGGACAC GGATGCGACG GATGAACACG GATCACATAA AAATATCCGT
GAACATCCGT CTGATCCGTG TAAATCCGTG GTTTATCCCA ACCCGGTCGC GTTTGAGATT
GTGGGGGATG GGTACGCGCC CCGGCCCCCC GGTTTCGACC CCGAACACGG CACGGTGAGG
GGCGCAGTGG TGACCTGTCC GGTCTGCGGG GCGACGATTG ACGCCGCCAC GACCCGCCGC
CTGTTCCGCG CCGGCAGGGC GGGTCAGCGC ATGGTCGCCG TCGTCACCAC CGACACGGAG
GCGGATGGAA GAGCGTCCGG CGGCAAAACC TACCGCCTGC CGACCGCAGA TGATCTGGAT
GCCTACCGCG CCGCCGAAGC CGCGCTGCAC GCGACATGCG AGCGCCTGCG CACCGCCTGG
GGGATGGAAC CCATGCCGGA CGAGCCGCTG CCACCGCAGG GCACCCTGGG TTTTCGTATC
CAGGGCTACG GTCTGGAAAC CTGGGGCGAC CTGTTCAACC CGCGCCAGGC GCTGGCGCTG
ATCACCTTCG CCGACGCCGT GCGCCGCGCC CACGCGCAGA TGCTCGCCCA GGGCTACCCT
GAAGACTTTG CAAAGGCGGT GGTGACGTAT TTGGGATTAG CCGTGAACAA ATTAGCAACT
TACTCTTGCA ATTTGGTTAG GTGGCGTGGC GATGTTCTGA GTTTTGAACG CGCTTTTGAT
CGCCAGGCTC TTCCTATGGT TTGGGATTAC GGTGAAATAA ACCCATTCAG TGGTGCTCGA
GGGGAATGGG ATGTAAGTGG TATCTGTCTG GTTCTCGACC ACCTCACCCG CATTCCTCCC
CTGCCGGGCA GGGAGCGCGC GCAGACACAG ACGGATGGAA CAGAGTCGCG CGGTCTCATC
CGTGACCATC CGTCCAATCC GTGGCAATCC GTGGTTGCTG CTCACCCGCG GCAATCCGTG
GTTCATTCTG TCACCCATGC CTCCGCCACG CGCCTGCCCT ACCCCGACGG CTTCTTCGAC
GCCGTGCTCA CCGACCCGCC CTACTACGAC AATGTGCCGT ACTCCTACCT CTCCGACTTC
TTCTACGTCT GGCTCAAGCG CAGCATCGGG CACCTCCACC CCGACCTGTT CACCACGCCG
CTCACGCCCA AGGCGGGCGA GATTGTGGCG TATGCCCACG GCGAGGGAGG CTTCGAGGCG
GGCAAACGCT TCTTCGAGGA GCAACTGGCG GCGGCCTTCC GCGAGATGGC GCGAGTGCTG
AAACCGGGCG GCATTGCCGT GGTGGTCTAC GCCCACAAAT CGACCGCCGG ATGGGAGACG
GTGATCAACG CCCTGCTCGA TTCGGGACTG GTCGTCAACG CCGCCTGGCC CCTCAACACC
GAGATGCAAA CCCGTCTGCG ATCGAACGAA TCGGCGGCGC TGGCGTCGTC GATCTACATC
GTGGCGCGCA AGGCGGCGCG GCGCGCCACC GGCTTCGTCA ACGAGGTGCG CGCCGAGTTG
CGCCGGGTGA TGCACCGCAA ACTCGACCGG CTGTGGGCGG AGGGGGTCGG CGGCGCCGAT
TTCTTCATCG CCGCCATCGG CGCCGGCATC GAGGTCTTCG GCGCTTACGA ACAGGTGATC
GACTACGAAG GGCATGTGAT CCGCGCCGAC CGGCTGCTCG ACGAGGTGCG CGCGCTGGCG
ACCGATTTCG CCGTGCAGCG CATTCTGCAG AACGGGTTCG CCGCCGAGAT TTCGCCGCTC
ACCCGCCTCT ACCTGCTGTG GCGCTGGAAC TACAAAGAGG CGCCCCTCCC CTTCGATGAA
GCGCGCAAAC TGGCGCAGTC GTGCGGGCTG GACATTGCCG AGACGTGGAG CAGGCACGGC
GCGGTGCGCA AGCAGAAGGA GTTCGTGCGC CTGCTGGGAC CGCACGAGCG GCGGCTGGAG
GAGCTGGACG ATCCGCGCGA CCTGGTGGAC GTGCTGCACC GTGCGCTGCT GCTGTGGGAA
AAGGGGAAGC GCGCCGATCT GGTGCAGACA CTGGTCGCCG GCGGGCGCAG CGAGGTCTTC
TACCGCGTGG CGCAGGCGAT CAGCGAGACG CTGCCGGTGG AGAGCCGCGA AAAGAAACTG
CTCGACGGCT TCCTCGCCGG GCGCGAGCGC CTGCGCGCCG AGGTCGAACA GACCGCCGCG
CAAATGAGAA TAGACTTTTA G
 
Protein sequence
MRDDRRFIEE TFPVKAVSQH AAKEKNIRHG HISTLHIWWA RRPLAASRAT AYAALVPPPA 
DALAWQTQSE FIADLSRWER ALDAPLLQRA RRAIYAAHAE RLSAELGRPV CVDDIEAGRV
PPPRILDPFA GGGSYPLEAL RLGCDAYAND YNPVAALILK ATLEYPQRFG GNGLGKRTRI
DTDGTDRHGF KKNIRDHPSD PCQSVVHTDP CQSVVHPESF GQTEMFSRDA PGNPLLAAVK
QWGEWVLNEA RKELAPFYPS SGAATVVGYI WARTLPCQNP SCGVDIPLMR QFWLAKKDRK
QVALCIVKRT QIDTDVGNRT RIHTDVTGEH GLGNRTRIHT DVTDEHGLRN KNIREHPSDP
CQSVVHSDSV SESCQSVVNL NRTRMDTDAT DEHGSHKNIR EHPSDPCKSV VYPNPVAFEI
VGDGYAPRPP GFDPEHGTVR GAVVTCPVCG ATIDAATTRR LFRAGRAGQR MVAVVTTDTE
ADGRASGGKT YRLPTADDLD AYRAAEAALH ATCERLRTAW GMEPMPDEPL PPQGTLGFRI
QGYGLETWGD LFNPRQALAL ITFADAVRRA HAQMLAQGYP EDFAKAVVTY LGLAVNKLAT
YSCNLVRWRG DVLSFERAFD RQALPMVWDY GEINPFSGAR GEWDVSGICL VLDHLTRIPP
LPGRERAQTQ TDGTESRGLI RDHPSNPWQS VVAAHPRQSV VHSVTHASAT RLPYPDGFFD
AVLTDPPYYD NVPYSYLSDF FYVWLKRSIG HLHPDLFTTP LTPKAGEIVA YAHGEGGFEA
GKRFFEEQLA AAFREMARVL KPGGIAVVVY AHKSTAGWET VINALLDSGL VVNAAWPLNT
EMQTRLRSNE SAALASSIYI VARKAARRAT GFVNEVRAEL RRVMHRKLDR LWAEGVGGAD
FFIAAIGAGI EVFGAYEQVI DYEGHVIRAD RLLDEVRALA TDFAVQRILQ NGFAAEISPL
TRLYLLWRWN YKEAPLPFDE ARKLAQSCGL DIAETWSRHG AVRKQKEFVR LLGPHERRLE
ELDDPRDLVD VLHRALLLWE KGKRADLVQT LVAGGRSEVF YRVAQAISET LPVESREKKL
LDGFLAGRER LRAEVEQTAA QMRIDF