Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0239 |
Symbol | |
ID | 5207174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 297127 |
End bp | 300447 |
Gene Length | 3321 bp |
Protein Length | 1106 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640593869 |
Product | hypothetical protein |
Protein accession | YP_001274625 |
Protein GI | 148654420 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1743] Adenine-specific DNA methylase containing a Zn-ribbon |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00821808 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCGACG ACCGCCGCTT CATCGAAGAA ACCTTCCCGG TCAAAGCCGT GAGCCAGCAC GCGGCGAAGG AGAAGAATAT TCGCCACGGG CACATCAGCA CGCTGCACAT CTGGTGGGCG CGCCGCCCGC TGGCCGCCTC GCGCGCCACC GCATACGCCG CGCTCGTTCC GCCGCCCGCC GACGCGCTCG CCTGGCAGAC GCAGAGCGAG TTCATCGCCG ACCTGAGCCG CTGGGAGCGT GCGCTGGACG CCCCGCTGCT GCAACGCGCC CGCCGCGCGA TCTACGCCGC CCACGCCGAA CGGTTGAGCG CCGAACTGGG GCGTCCCGTC TGTGTGGACG ACATCGAAGC CGGGCGCGTC CCGCCGCCGC GCATCCTCGA CCCGTTCGCA GGCGGCGGCT CCTATCCGCT CGAAGCCCTG CGCCTGGGAT GCGACGCTTA CGCCAACGAC TATAACCCGG TCGCCGCGCT GATCCTCAAA GCCACCCTGG AGTACCCGCA GCGGTTTGGT GGGAACGGAT TGGGGAAGAG AACACGGATC GACACGGATG GGACGGATCG GCACGGATTC AAGAAAAATA TCCGTGACCA TCCGTCTGAT CCGTGCCAAT CCGTGGTTCA TACCGATCCG TGTCAATCCG TGGTTCATCC CGAAAGCTTC GGGCAGACGG AGATGTTCAG CCGGGATGCG CCGGGCAACC CCCTGCTGGC GGCGGTGAAG CAGTGGGGGG AATGGGTGCT GAACGAGGCG CGCAAAGAAC TGGCGCCGTT CTACCCGTCG TCCGGCGCTG CCACCGTCGT CGGCTACATC TGGGCGCGCA CGCTCCCCTG CCAGAACCCG TCCTGCGGCG TTGACATCCC GCTCATGCGC CAGTTCTGGC TGGCAAAAAA AGACAGGAAA CAAGTTGCGC TTTGTATTGT GAAGAGAACA CAGATCGACA CGGATGTGGG GAATAGAACA CGGATACACA CGGATGTAAC GGGTGAACAC GGATTGGGGA ATAGAACACG GATACACACG GATGTAACGG ATGAACACGG ATTAAGGAAT AAAAATATCC GTGAACATCC GTCTGATCCG TGCCAATCCG TGGTTCATTC TGACTCTGTG TCTGAATCGT GCCAATCCGT GGTTAATTTG AATAGAACAC GGATGGACAC GGATGCGACG GATGAACACG GATCACATAA AAATATCCGT GAACATCCGT CTGATCCGTG TAAATCCGTG GTTTATCCCA ACCCGGTCGC GTTTGAGATT GTGGGGGATG GGTACGCGCC CCGGCCCCCC GGTTTCGACC CCGAACACGG CACGGTGAGG GGCGCAGTGG TGACCTGTCC GGTCTGCGGG GCGACGATTG ACGCCGCCAC GACCCGCCGC CTGTTCCGCG CCGGCAGGGC GGGTCAGCGC ATGGTCGCCG TCGTCACCAC CGACACGGAG GCGGATGGAA GAGCGTCCGG CGGCAAAACC TACCGCCTGC CGACCGCAGA TGATCTGGAT GCCTACCGCG CCGCCGAAGC CGCGCTGCAC GCGACATGCG AGCGCCTGCG CACCGCCTGG GGGATGGAAC CCATGCCGGA CGAGCCGCTG CCACCGCAGG GCACCCTGGG TTTTCGTATC CAGGGCTACG GTCTGGAAAC CTGGGGCGAC CTGTTCAACC CGCGCCAGGC GCTGGCGCTG ATCACCTTCG CCGACGCCGT GCGCCGCGCC CACGCGCAGA TGCTCGCCCA GGGCTACCCT GAAGACTTTG CAAAGGCGGT GGTGACGTAT TTGGGATTAG CCGTGAACAA ATTAGCAACT TACTCTTGCA ATTTGGTTAG GTGGCGTGGC GATGTTCTGA GTTTTGAACG CGCTTTTGAT CGCCAGGCTC TTCCTATGGT TTGGGATTAC GGTGAAATAA ACCCATTCAG TGGTGCTCGA GGGGAATGGG ATGTAAGTGG TATCTGTCTG GTTCTCGACC ACCTCACCCG CATTCCTCCC CTGCCGGGCA GGGAGCGCGC GCAGACACAG ACGGATGGAA CAGAGTCGCG CGGTCTCATC CGTGACCATC CGTCCAATCC GTGGCAATCC GTGGTTGCTG CTCACCCGCG GCAATCCGTG GTTCATTCTG TCACCCATGC CTCCGCCACG CGCCTGCCCT ACCCCGACGG CTTCTTCGAC GCCGTGCTCA CCGACCCGCC CTACTACGAC AATGTGCCGT ACTCCTACCT CTCCGACTTC TTCTACGTCT GGCTCAAGCG CAGCATCGGG CACCTCCACC CCGACCTGTT CACCACGCCG CTCACGCCCA AGGCGGGCGA GATTGTGGCG TATGCCCACG GCGAGGGAGG CTTCGAGGCG GGCAAACGCT TCTTCGAGGA GCAACTGGCG GCGGCCTTCC GCGAGATGGC GCGAGTGCTG AAACCGGGCG GCATTGCCGT GGTGGTCTAC GCCCACAAAT CGACCGCCGG ATGGGAGACG GTGATCAACG CCCTGCTCGA TTCGGGACTG GTCGTCAACG CCGCCTGGCC CCTCAACACC GAGATGCAAA CCCGTCTGCG ATCGAACGAA TCGGCGGCGC TGGCGTCGTC GATCTACATC GTGGCGCGCA AGGCGGCGCG GCGCGCCACC GGCTTCGTCA ACGAGGTGCG CGCCGAGTTG CGCCGGGTGA TGCACCGCAA ACTCGACCGG CTGTGGGCGG AGGGGGTCGG CGGCGCCGAT TTCTTCATCG CCGCCATCGG CGCCGGCATC GAGGTCTTCG GCGCTTACGA ACAGGTGATC GACTACGAAG GGCATGTGAT CCGCGCCGAC CGGCTGCTCG ACGAGGTGCG CGCGCTGGCG ACCGATTTCG CCGTGCAGCG CATTCTGCAG AACGGGTTCG CCGCCGAGAT TTCGCCGCTC ACCCGCCTCT ACCTGCTGTG GCGCTGGAAC TACAAAGAGG CGCCCCTCCC CTTCGATGAA GCGCGCAAAC TGGCGCAGTC GTGCGGGCTG GACATTGCCG AGACGTGGAG CAGGCACGGC GCGGTGCGCA AGCAGAAGGA GTTCGTGCGC CTGCTGGGAC CGCACGAGCG GCGGCTGGAG GAGCTGGACG ATCCGCGCGA CCTGGTGGAC GTGCTGCACC GTGCGCTGCT GCTGTGGGAA AAGGGGAAGC GCGCCGATCT GGTGCAGACA CTGGTCGCCG GCGGGCGCAG CGAGGTCTTC TACCGCGTGG CGCAGGCGAT CAGCGAGACG CTGCCGGTGG AGAGCCGCGA AAAGAAACTG CTCGACGGCT TCCTCGCCGG GCGCGAGCGC CTGCGCGCCG AGGTCGAACA GACCGCCGCG CAAATGAGAA TAGACTTTTA G
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Protein sequence | MRDDRRFIEE TFPVKAVSQH AAKEKNIRHG HISTLHIWWA RRPLAASRAT AYAALVPPPA DALAWQTQSE FIADLSRWER ALDAPLLQRA RRAIYAAHAE RLSAELGRPV CVDDIEAGRV PPPRILDPFA GGGSYPLEAL RLGCDAYAND YNPVAALILK ATLEYPQRFG GNGLGKRTRI DTDGTDRHGF KKNIRDHPSD PCQSVVHTDP CQSVVHPESF GQTEMFSRDA PGNPLLAAVK QWGEWVLNEA RKELAPFYPS SGAATVVGYI WARTLPCQNP SCGVDIPLMR QFWLAKKDRK QVALCIVKRT QIDTDVGNRT RIHTDVTGEH GLGNRTRIHT DVTDEHGLRN KNIREHPSDP CQSVVHSDSV SESCQSVVNL NRTRMDTDAT DEHGSHKNIR EHPSDPCKSV VYPNPVAFEI VGDGYAPRPP GFDPEHGTVR GAVVTCPVCG ATIDAATTRR LFRAGRAGQR MVAVVTTDTE ADGRASGGKT YRLPTADDLD AYRAAEAALH ATCERLRTAW GMEPMPDEPL PPQGTLGFRI QGYGLETWGD LFNPRQALAL ITFADAVRRA HAQMLAQGYP EDFAKAVVTY LGLAVNKLAT YSCNLVRWRG DVLSFERAFD RQALPMVWDY GEINPFSGAR GEWDVSGICL VLDHLTRIPP LPGRERAQTQ TDGTESRGLI RDHPSNPWQS VVAAHPRQSV VHSVTHASAT RLPYPDGFFD AVLTDPPYYD NVPYSYLSDF FYVWLKRSIG HLHPDLFTTP LTPKAGEIVA YAHGEGGFEA GKRFFEEQLA AAFREMARVL KPGGIAVVVY AHKSTAGWET VINALLDSGL VVNAAWPLNT EMQTRLRSNE SAALASSIYI VARKAARRAT GFVNEVRAEL RRVMHRKLDR LWAEGVGGAD FFIAAIGAGI EVFGAYEQVI DYEGHVIRAD RLLDEVRALA TDFAVQRILQ NGFAAEISPL TRLYLLWRWN YKEAPLPFDE ARKLAQSCGL DIAETWSRHG AVRKQKEFVR LLGPHERRLE ELDDPRDLVD VLHRALLLWE KGKRADLVQT LVAGGRSEVF YRVAQAISET LPVESREKKL LDGFLAGRER LRAEVEQTAA QMRIDF
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