| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0231 |
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| Symbol | |
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| ID | 5207166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 283660 |
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| End bp | 286194 |
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| Gene Length | 2535 bp |
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| Protein Length | 844 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640593861 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_001274617 |
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| Protein GI | 148654412 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.794534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.63544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTATT CACCAGCGCA TGATCAACCG GAGAGCGCCG ATCTGCTCTT TGAAGTGATT
GACCACATTC CTGCGGGGAT TCTGGTCGTA TCGCTGCCCG ACTTTCGCAT CCTGGCGATC
AATGCGCGCG CCTGCGCTCG CCTCGGTATT CGTATCTCGG CGACGCTCAC CGGTCGCCTG
TGCCGTGATG TTATCCCCCG CTTCAGCGAC GATCGCCTCG ATGACCTGTG GCTTTCGATG
GCAGGTCTCC GGCACGATGA CACGGTGCCA GCAACGCAGA TCGGCGGAGT GGTGTCGCGG
CGCTGGAATG CGTACCCTGT CCGTGATCAG CACGGGCATG CTGTGCGTCT GCTGCTCGTC
TGGCTCGAAG CGGGTGAAAC TCCGGAACAT CAGTTCGCCA GCAGCGCACA GCACATCACC
CAGGCGCTGA TCTCGACCCT CGACCGCGAC CAGCTTCTCG ATCTCATCCT GGAACACCTC
CACAGCATTG TTTCGTATGA CAGCGCGGCG ATCATTCTGC GCGACGACGA TGGGTACTAC
ATCGCCGCGA GCCGGGGTCT GCCTGATCGC ACGGCGCCGA CCTACCAACG GCTCCCTAAA
GACAATGCGC TGCTCAACCG CATCGAAACC GTCGGTGAAC CGGTGATTGT GCGTCGTTTG
CCTGAAGATG CAATCGAAGC CATGTGTTCG TTATCGAACG CGCCGGGTGA ATGGCTGAGT
GTGCCGCTGC GCGCTCAGGG TGACGTGGTT GGCATGCTCA CCCTGTTCAG CCGATTACCC
AACCGTTATA CCCGCGCCGA TGCTGCGCGC GCCCAGGCGT TCGCCACCTA CGCAGCGCTG
GCGGTACGCA ACGCCGAACT CTACCGCCGC GCCCGCGAAC AGAGCGCCCG TCTCGCGCTG
GTGAACAAAA TCGCGCGGAC GATTACCGCC ACGCACGATC TGCGCGCGAT CTTCGATCAT
CTGATCGAGC ACCTGCACGG CGTGGTTCCA CTCGATAGCG CCGAACTGGC GCTCTTTGAT
CGCACGGCGC AGCATCTCCA GCCAGTCGCG CACTATCCGG CGTCGGATAA CACCGAAACG
CTCTGCGTCC ATTACCACGA CCAGGATACG ATCTTCCTGC GACGCCTGAT TGAACAGCGT
CAACCGGTGT TGCTGCCGCT GGACGATACC GGCAACCCGC CCCTCACGCA ACGCCTCGTT
GCAGCTGGCA TCCGGTCGTG CCTGATCGTT CCTATCGTCG ATGGCGAAAA CCTTTCCGGC
ATGCTGCTGC TGGCAAGTCG GCAATCGAAC GCTTTCCCTG CCATCGAGAT CCGCACCTTT
GCCGATCTTG CGCAGCATCT TGCGGTTGCG ATTCAAAACG CACAACTGCA TCAGGCGCGC
GAGCAGGCGA TAGCGAATCT GCGCATCGCC CAGCAGCGCC TCATCCAGTC AGAACGACTG
ACCGCAGTCG GCGAACTGGT TGCCGGTGTA GCGCACGAAC TCAACAATCC GCTCACCGCC
GTGCTGGGTT TTGCCGGCAT TTTGCAAGAA GTCGCGCCGG CTGAATACCA GCACGACCTG
ACGATGATCG TCGAAAGCGC CACCCGCGCG CGACGGATCG TGCAGAATCT GCTGACATTC
GCGCGGCAAC GCGAGGCGCA CCTGGAGGAG GTCGATCTGA ACCTGGCTGC ACGGCAGGTG
TTGAGCCTGC TCGCCTATCA GATGCGCACA CACAACATCA CAGTCGAAGA ACGCCTCCAG
CCGCAGTTGC CGCTGACCGT CGCCGATGCG ACGGCGATCA AGCAGGTAAT GCTCAATCTG
TTGAACAACG CGCAGCAGGC GCTGGCTTCC TGGAGCGGTC GGCGAACGAT TGTCGTCACG
ACACGGCTGG AGTTGCGCGA AAATCGTCAG TGGCTTGTGC TTGAAATTGC CGATACCGGT
CCCGGCATTG CGCCTGAACA TCTGCCGCGC ATTTTTGAGC CATTCTTCAC CACCAAGCCG
GTCGGTGAAG GAACCGGACT GGGACTGTCG ATCTGTTACG GCATCGTCCG GCAGTATCAT
GGCAACATTC GCGTGCAGAG CGCTCCTGGC AAGGGGGCAT GCTTTACTGT CGAACTGCCG
GTGCAGTCAT TTGTATCAGT TCCGTCAACC AGGGATACGA CGGTTACCGT TCAGCCCTCT
TCGCGCTACC ATATTCTGGT GGTTGATGAT GAAGCGGCGG TGGCGGAATT GATCGCGCGA
TTGCTGCGCG AACAGCGGTG TATTGTTGAT GTGTGCCACG ACGGGGCGCA GGCGCTTGAT
CTGCTCAGCC GCGTCGCCTA CGATCTGATC ATTTGTGATG TGCGGATGCC GGGGATGAGC
GGCGATGAAC TTTTCGTCGA ATTAAAACAG CGCGCGCCGC ATCTTGTGCG GCGCGTCCTG
TTCGTCAGCG GCGACACTGC CAGTCGCAGC ACGCGCGATT TCTTCGAGCG GAGCGGCGTC
GGTTATATCG AGAAACCGTT TACTGCATCA GAGCTGATCG ATGCAGTGCA GCGGTCGCTT
GCCGCTGTGT CGTAA
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| Protein sequence | MGYSPAHDQP ESADLLFEVI DHIPAGILVV SLPDFRILAI NARACARLGI RISATLTGRL
CRDVIPRFSD DRLDDLWLSM AGLRHDDTVP ATQIGGVVSR RWNAYPVRDQ HGHAVRLLLV
WLEAGETPEH QFASSAQHIT QALISTLDRD QLLDLILEHL HSIVSYDSAA IILRDDDGYY
IAASRGLPDR TAPTYQRLPK DNALLNRIET VGEPVIVRRL PEDAIEAMCS LSNAPGEWLS
VPLRAQGDVV GMLTLFSRLP NRYTRADAAR AQAFATYAAL AVRNAELYRR AREQSARLAL
VNKIARTITA THDLRAIFDH LIEHLHGVVP LDSAELALFD RTAQHLQPVA HYPASDNTET
LCVHYHDQDT IFLRRLIEQR QPVLLPLDDT GNPPLTQRLV AAGIRSCLIV PIVDGENLSG
MLLLASRQSN AFPAIEIRTF ADLAQHLAVA IQNAQLHQAR EQAIANLRIA QQRLIQSERL
TAVGELVAGV AHELNNPLTA VLGFAGILQE VAPAEYQHDL TMIVESATRA RRIVQNLLTF
ARQREAHLEE VDLNLAARQV LSLLAYQMRT HNITVEERLQ PQLPLTVADA TAIKQVMLNL
LNNAQQALAS WSGRRTIVVT TRLELRENRQ WLVLEIADTG PGIAPEHLPR IFEPFFTTKP
VGEGTGLGLS ICYGIVRQYH GNIRVQSAPG KGACFTVELP VQSFVSVPST RDTTVTVQPS
SRYHILVVDD EAAVAELIAR LLREQRCIVD VCHDGAQALD LLSRVAYDLI ICDVRMPGMS
GDELFVELKQ RAPHLVRRVL FVSGDTASRS TRDFFERSGV GYIEKPFTAS ELIDAVQRSL
AAVS
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