Gene RoseRS_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0229 
Symbol 
ID5207164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp281771 
End bp282835 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content66% 
IMG OID640593859 
Productbeta-lactamase 
Protein accessionYP_001274615 
Protein GI148654410 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCA TCTCTCGTCT TGCTGCGGCG CACGCCGCCG CCCGATCGCT GGTTGCGTCC 
GGGCGCATTC CGGGTGTAGT GGTCGCTCTG GCAGTCGGCA ACCGGCAGCC GGATATCTGT
GCAGTCGGTT CGGATGCCGA CGGACGTCCG CTTACCCCCG ACGATCTCTT TCCGGTTGCC
TCGATCACGA AACTCGCGAC CGCGCTCGCC GTTCTGCGTC TGGTTGATCG CGGATTGATC
GCGCTCGACG ATCCGGTTGA CCGGTTTCTC CATCGGGAAG CGCCGCATCC CGGCGTTACC
ATCCGTCGTC TGCTCTGCCA CACTGCCGGA TTTCCCATCG ACCTGAGCAG CGACGATGCT
CCTTACGAAC CGGGATTGAC GTGGGAGGCG CTGGGGCGGG CATGCCTGCG GGCGAAACTG
CGCCACCAAC CGGGAACGGA GGTGCTCTAC AGCAATATCG GCTACGGATT GCTGGCGCTG
GTTGTGGAAG CGCGCGCCGG CGCGCGTTTT CGTGATGCGT TACGTAACCT GGTGCTGACG
CCGCTCGGTA TCGAAGGGTA TCTGGGAGAA GAACCGCCGC GCGCGCCGGC GCGCATCGCT
GATGTGCGCG GACGTCACCG CGCAACAGCA CTGGAACCGT TCAACTCGAC GTTCTGGCGA
TCACTGGCGC TGCCGTGGGC TGGACTGATC ACGAACGCAG CCGGCGCCCT GGCGCTGGTG
CGCGCGTTTC GTGGGCATCC GCCGGGTTTT CTCAGTCCAC CCCTGCGCAC TGCGGCGGTC
ACCGATCAGA CGGGTCATTT GCCGGGAGGG TTCATCGAGC CGTTGTGGTG GGATCGCTGC
CCGTGGGGAT TGGGACCGGA AGTGCGCGGC GTGAAGGAAC CGCACTGGCT GCCGTCGAGT
GTCGGCGCCG ATTCGTTCGG GCACACCGGC GCGTCGGGAT GCCTGGCGTG GGCGGCGCCG
GGCGCTGATG TTGCCTGGGC AATCCTCGGC GCGCGCACCG CCGATAACGG CTGGTTGTTG
CGCCATTCGC GGACGATCAG TGCAGCAGTG GCGGGGGAGC GTTGA
 
Protein sequence
MNSISRLAAA HAAARSLVAS GRIPGVVVAL AVGNRQPDIC AVGSDADGRP LTPDDLFPVA 
SITKLATALA VLRLVDRGLI ALDDPVDRFL HREAPHPGVT IRRLLCHTAG FPIDLSSDDA
PYEPGLTWEA LGRACLRAKL RHQPGTEVLY SNIGYGLLAL VVEARAGARF RDALRNLVLT
PLGIEGYLGE EPPRAPARIA DVRGRHRATA LEPFNSTFWR SLALPWAGLI TNAAGALALV
RAFRGHPPGF LSPPLRTAAV TDQTGHLPGG FIEPLWWDRC PWGLGPEVRG VKEPHWLPSS
VGADSFGHTG ASGCLAWAAP GADVAWAILG ARTADNGWLL RHSRTISAAV AGER