| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0223 |
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| Symbol | |
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| ID | 5207158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 270768 |
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| End bp | 275903 |
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| Gene Length | 5136 bp |
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| Protein Length | 1711 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640593853 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001274609 |
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| Protein GI | 148654404 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.229884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCT TCAAGTTGCG CGACCATATC GTCAATGAGT TCGCCGCATA TACGCAAAGT
TTCCTGAACA TTCTCGACCC CGATATTCGT GAGTTTGTGC AGCAAGAACT TGCGCGCGGC
AAACTCTGGC CCGATGCCCT CGTGCAACTC TCACCCGCCT ACGACCGCTC TCTGACGGTT
GCCGATCTGG TTGAACAGGG CATCCTGCAT CCGCTCTGCC GTGATATTTT TCAGGTCGGC
GGAGCGACGA AATCATCCCT GCGGCTCTAC CGCCATCAGA AACAGGCCAT CGATATGGCC
GCCGCCGGTC GGCACTATGT GGTGACGACC GGAACCGGTT CAGGCAAGAG CCTGACCTAT
ATCATCCCGA TTGTCAACCA CATCCTGCGC AACCGTCCCG AAGATGGGCG TGTTCGTGCA
ATCATCGTCT ACCCGATGAA TGCGCTGATC AACTCACAGG CGCAGGCGAT CAAGCGTTTC
TTTGAGAATG CGTCCGGCAG GTGTCCGGTA CGTTTTGCGC GCTACACCGG TCAGGAAAAC
GACGCGGAAA AAAAGGGCGT TCAGGAGAAC CCGCCGCACA TCCTGTTGAC CAACTATGTG
ATGCTGGAAT TGATGCTGAC GCGCCCCGAG GAGTTTGCGT TTGTCGATGC CAGCGCCGCC
AACCTGCAAT TCGTGGTGCT CGACGAATTG CATACCTACC GCGGGCGTCA GGGCGCCGAC
GTGGCGATGC TGATGCGGCG TCTGCGCGAG CGCTGCGGCA ATCCGAACCT GATCTGCATT
GGCACCAGCG CCACGATCGT CAGTGGCGAG TCGGTTGATG ATCGGCGAGC GGGCGTTGCC
CGTGTAGCCG AGACGATCTT CGGCGTGCCG TTCACTGCCG AGCAGGTGAT CGAGGAAACG
CTGATCTACG CAACCCCTGC GGCATCGATC ACAAATGCAG AGTTGCGCGC GGCTCTCGAA
GATAATCCTC CGGAACGCCT GGACTGGAAT GCCTTTCAAC GGCATCCGCT GGCGCGCTGG
ATCGAACAGA CTTTCAGTTT GCGCACCGAT GCACAGGGAC GCCAGCGCCG CGCCGAGCCA
CGCACACTGC GTGACGGTGC ACAGGCGCTT GCGCAGCAGA CCGGCGTTCC TGTCGAACGG
TGCGAGAAGT ATCTCCGCCA TTTCTTCGCC CTGGGCAGCA ACGTCAGAGA CCCGGAGGGC
AATCCGGGGT TCGCCTTCAA ACTGCACCAG TTCATCTCCC AGGGCAGCGC CGTGTACAGC
ACGCTGGAAC TTCCGCCAGC GCGTCATCTG ACGCTCGAAG GGCAGCAGTA TGTCGCCGGT
TCGGACGGTG ATCGGTTACT CTTCCCGCTT GTTTTCTGCC GCGAATGTGG TCAGCATTAT
GCGCTCTGCG CCTACGACGA GGAGCACGGT CAGGTTGTCC CGCGGCACCC GATGCTGCGC
GGCGAGGATG TGACCGAACC GGCGCGCGCC GGATACCTGC TGATCGGCGC CGACGCCTGG
AGCGAGGAAC TCGAGGACAC GTTGCCCGAC ACGTGGTTTA ATGTGCGCCG CAACGGGCGC
ACACTGAAGA AGGAGTATCG CGAGTTCGCA CCAAAGCGCC TGTACGTGCG CCCCGACGGT
CAGACGTTCG ATCCGGAGCG GGTTGGCGCC CGTCCTGGCG GTGCAGTGGA CGCCTGGTTT
CTTGCTGCGC CGTTTCTCAC ATGCCTCTCC TGCGGCGCGG TGTACACCCG CAGAGACAGG
GACGACTTTC GGAAACTGGC GCGCCTGAGC AGCGAGGGGC GCAGCACGGC GACCACGCTG
ATCTCGCTGA GCGCCATCGA AGCGATGCAC ACCACCGACC TCGATCCGAA AGCGCGCAAA
TTGCTCAGTT TTACCGATAA TCGCCAGGAT GCGTCGTTGC AGGCGGGCCA TTTCAACGAC
TTTGCCGCCG TCAGTCTGTT GCGGGCTGCA ATCGCTGCTG CGCTGCAGAA AGCTTCGCCT
TCCAATCCAC TGACCCACCT GACTATCGCA CCAGCGGTGT TCAGGGAACT CAACCTGCCG
CAGGAGGCGT ATGCGCGCAC CGTCGGCGAA TATGGCGGCG CCCGGCGACG CAACGAGGAA
GTGCTGACCG CGTATCTGGA GTATCGCATC TTCGAGGACC TGCGCCGCTC ATGGCGCGTG
ACGCAACCCA ACCTGGAACA GTGCGGTTTG CTGCGGATCG ACTATCTCGA CCTGCACGAT
CTCTGTGCTG ATGATCGACC GTGGCAGCGT CACCCGGTTC TGGCGGCTAC GCCGCCTGAT
CAGCGCGAGC GCACCATCCG CGCCCTGCTC GACCATATGC GGCGCGAACT GGCAATCGAT
GCACCCTGTC TCGATCCGGA ACAGCAACCA GAACTGCTCC GCCGCGTCGA TGCTGCGCTC
AAAGAGCCAT GGGTCTTCGA TGAAGCCGAA AAGCGCCCAA ATGGGTTGCG CATGGCGACG
CGCTTCGTGC TCCCCGGCGA CGATACGAAC GTTCCCGGCG CGCGAAGCCT CTCCCGATAC
AGCCGCGCAG GGCGCTTCCT GCGCTCATCG GCAGCCTGGA GCGCGCTCGA AGCGCCGCTC
GATGATCAGG AGTATGCGGC GCTGCTGACG ACATTGTTCG AGATCCTGAT GGGCGCGGGG
ATTCTGGTTG ACGTGACTGT GCGGCGCGGA CTGCGCGCAT TTCAGATCCG GCGCGATGCG
TTGCTGTGGT TGCCCGGTGA TGGAACGCCG CCGCTGCCTG ATCCGATCCG TTCCCAACGA
ATGACGACTG TTGCACGGGC GGCGTCTGAC GACACGCAGA ACGGCGCTGC TCGCACCCCG
GCGAATGCCT TCTTTTCCAG GTTCTACCTC CGTCCGCCAG AGCGGTTGCT GCGGATCGAA
GGGCGGGAGC ACACGGGACA GGTAACGCAG GAAGACCGTC AGGAGCGCGA GCGACGCTTC
CGTGAAGGCG AACTTCCGGT GCTCTTCTGC TCGCCAACTA TGGAACTGGG GATCGACATC
GCCGACCTGA ATGCGGTTCA TATGCGCAAC ATGCCGCCAA CCCCCGCCAA CTATGCGCAG
CGATCCGGTC GAGCAGGGCG CAGCGGTCAA CCCGCGCTGG TCATCACCTA CTGTTCGACC
GCCAGCGGGC ACGACCAGTA TTTCTTTCAG CGCCCGAAGG ACATGGTCGC CGGGGCAGTG
GCAGCGCCGC AGATCGACCT GACCAACGAA GATTTGCTGA AGGCGCATGT CCACGCGATC
TGGCTGGCGG AGACGGGGCT TGATCTGAAA CGCTCAATGC TCGACCTGAT CGATGCCGGC
GCGCCAGACC TGCCGCTCAA ATCGGAGGTG CAGGAACACA TCATGCTGGA CGATTCCCGC
CGGGCAGCGT GTGTCGCCCG GGCGCGGCGC GCCTTCGGCG GGCTGCTCGC ATCTCTTCCA
GGCGAATGGT TCGACGAGGG GTGGCTGGAG CGGGTCATCA ACGACGCGCC GCGTCACTTC
GACGAGGCTT GCAACCGCTG GCGACAACTC TACACCGATG CGCGGGCGCA GTTAAACGAA
GCGCGTCGCA TCACCGACGA CTGGCACCGC GGCATCGGCA CGCGCGAGAT TGCCGACGAT
GCCGAACAGC GTGAGAAAGA AGCGAAACGC CAGATCGATC TGCTGTGCAG CCACGAGCGT
TCCAGCAGCG AAAGCGACTT CTACCCCTAC CGCTACTTCG CCAGCGAGGG GTTTCTCCCC
GGTTACAACT TCCCGCGTCT GCCGGTGCGC GCATTTCTGG CGCACAGACT GGGAGAAGGG
GTTTACCTGG CTCGACCGCG TTTCCTGGCG ATCCGCGAGT TTGGTCCGCA AAACATCATT
TACCACGAAG GGCGCAAATA TCGCGTGACC CGCACCACCA TCCCGGCTGG TGATGCAAGC
CGTCGCTTTC TGCGCGCAAA GATCTGTCGC GCCTGCGGCT ACTTCCACGA AGGCGGCGAT
GCCGATGTCT GCGACCAGTG CGGCTTACTG CTCACCGGTC AGAATACAAC GATCCTGCCG
ACCCTCTTCG AGATGAGCAC CGTCATCGCC ACCCCCGCCG ACCGGATCAC CTGTGAAGAG
GAAGAACGTG TTCGCAAGGG GTACAATCTG GAAATGTTCT ACCAGTTTGC GCGGGGACCG
CACGGCGCTC GCCGTGATAC AGGCAATGTT CAACTGGAGA CGGCGGAAGG GCGCCAGGAG
CATATTGCGC TCACCTATGC GCCAACGGCG ACGATCTGGC AGGTGAATCA CGGCTGGAAG
CGCTCGAATA ACGGCTTTGC GCTCAACGTG CGCAGTGGCG AATGGGGAAG CGACCCCGCC
GATGATGATG ATAACGAAGC TGATCCAGGT CAGCGGAACG AAGATGTGCG CACGGGCGTG
CGGCTCGTGG TGCGCGACAC GCGCAATCTG CTCGTTGTTG AACTGCCGCC GTCGCTCGCC
GCGCAGGAAC AGGTTGCGGC AAGCCTGCAG TATGCGTTGC AATCCGGCAT CACCGTCGCT
TTCCAGCTCG AAGAGCAAGA GTTGAGTTCC AGACGTCTCG GTTCAGGTGC GACGACGCGC
CTGATCTTCT GGGAAGCCGC CGAGGGAGGA GCGGGAGTGC TGCGACGGTT GGTGGAGGAG
CCGGAAGCGC TTGCGCGGGT CGCGCGCGCT GCGCTCGAAC TCTGCCACTA CGATGAACAT
GGACAGGAGC GCAGTGATGT TGGAGAATGC GTGCGCGCCT GCTACCGCTG CCTCCTCTCG
TACAGCAACC AGCCCGACCA CGGGCTGCTC GACCGCCGCT CCATCCGCGA TCTCCTGATC
GATCTGTCCC GGTCACGGGT GCAGCGCCAG CGCCACGATG ATCGTGATAC ACCCGAGCAC
ACCGCGCTAC CCGCCGTCTC TCCCGCCATT GCGCGGGTGC TGACTGCCAT CCGCGACCTG
GGCGGGCGTG AACCGGATCA GATCCTGCCC GATCTGGACG GCTGCCGCCC ACACCTCGTC
TATCGTCCAG GCTACTGCAT TCTCTGCCCG GAAGCGGGTG AAGACCTCGC TCCTCTGCGC
GCTACCCTGG AAGAGTCCGG GTATGCGGTC GTCGTCATTC ACCCGAACGA CGATGTGGCC
GCAGTGCTGG GATCATACGA CTTCTGGCGC ATGTGA
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| Protein sequence | MDIFKLRDHI VNEFAAYTQS FLNILDPDIR EFVQQELARG KLWPDALVQL SPAYDRSLTV
ADLVEQGILH PLCRDIFQVG GATKSSLRLY RHQKQAIDMA AAGRHYVVTT GTGSGKSLTY
IIPIVNHILR NRPEDGRVRA IIVYPMNALI NSQAQAIKRF FENASGRCPV RFARYTGQEN
DAEKKGVQEN PPHILLTNYV MLELMLTRPE EFAFVDASAA NLQFVVLDEL HTYRGRQGAD
VAMLMRRLRE RCGNPNLICI GTSATIVSGE SVDDRRAGVA RVAETIFGVP FTAEQVIEET
LIYATPAASI TNAELRAALE DNPPERLDWN AFQRHPLARW IEQTFSLRTD AQGRQRRAEP
RTLRDGAQAL AQQTGVPVER CEKYLRHFFA LGSNVRDPEG NPGFAFKLHQ FISQGSAVYS
TLELPPARHL TLEGQQYVAG SDGDRLLFPL VFCRECGQHY ALCAYDEEHG QVVPRHPMLR
GEDVTEPARA GYLLIGADAW SEELEDTLPD TWFNVRRNGR TLKKEYREFA PKRLYVRPDG
QTFDPERVGA RPGGAVDAWF LAAPFLTCLS CGAVYTRRDR DDFRKLARLS SEGRSTATTL
ISLSAIEAMH TTDLDPKARK LLSFTDNRQD ASLQAGHFND FAAVSLLRAA IAAALQKASP
SNPLTHLTIA PAVFRELNLP QEAYARTVGE YGGARRRNEE VLTAYLEYRI FEDLRRSWRV
TQPNLEQCGL LRIDYLDLHD LCADDRPWQR HPVLAATPPD QRERTIRALL DHMRRELAID
APCLDPEQQP ELLRRVDAAL KEPWVFDEAE KRPNGLRMAT RFVLPGDDTN VPGARSLSRY
SRAGRFLRSS AAWSALEAPL DDQEYAALLT TLFEILMGAG ILVDVTVRRG LRAFQIRRDA
LLWLPGDGTP PLPDPIRSQR MTTVARAASD DTQNGAARTP ANAFFSRFYL RPPERLLRIE
GREHTGQVTQ EDRQERERRF REGELPVLFC SPTMELGIDI ADLNAVHMRN MPPTPANYAQ
RSGRAGRSGQ PALVITYCST ASGHDQYFFQ RPKDMVAGAV AAPQIDLTNE DLLKAHVHAI
WLAETGLDLK RSMLDLIDAG APDLPLKSEV QEHIMLDDSR RAACVARARR AFGGLLASLP
GEWFDEGWLE RVINDAPRHF DEACNRWRQL YTDARAQLNE ARRITDDWHR GIGTREIADD
AEQREKEAKR QIDLLCSHER SSSESDFYPY RYFASEGFLP GYNFPRLPVR AFLAHRLGEG
VYLARPRFLA IREFGPQNII YHEGRKYRVT RTTIPAGDAS RRFLRAKICR ACGYFHEGGD
ADVCDQCGLL LTGQNTTILP TLFEMSTVIA TPADRITCEE EERVRKGYNL EMFYQFARGP
HGARRDTGNV QLETAEGRQE HIALTYAPTA TIWQVNHGWK RSNNGFALNV RSGEWGSDPA
DDDDNEADPG QRNEDVRTGV RLVVRDTRNL LVVELPPSLA AQEQVAASLQ YALQSGITVA
FQLEEQELSS RRLGSGATTR LIFWEAAEGG AGVLRRLVEE PEALARVARA ALELCHYDEH
GQERSDVGEC VRACYRCLLS YSNQPDHGLL DRRSIRDLLI DLSRSRVQRQ RHDDRDTPEH
TALPAVSPAI ARVLTAIRDL GGREPDQILP DLDGCRPHLV YRPGYCILCP EAGEDLAPLR
ATLEESGYAV VVIHPNDDVA AVLGSYDFWR M
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