Gene RoseRS_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0216 
Symbol 
ID5207151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp261099 
End bp262121 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content64% 
IMG OID640593846 
Productglyoxylate reductase 
Protein accessionYP_001274602 
Protein GI148654397 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCC GAGCCTATAT CACGCGGCGT CTCCCGCAGG CGGCAATTGA TATTGTGTCT 
GCCGCCTGTG AGACGACGCT GTGGGACGAT GAAGCCAACC CTGTGCCGCG CGAAACGCTC
CTGCGCGCTG TGGCGGATGT GGATGGCATT CTGACTCTGC TGACCGACCG CGTCGATACT
GAACTGCTCG CTGCCGCCCC GCGCCTGAAG GTCGTCGCCA ATATGGCAGT CGGGTACGAC
AATGTCGATC TGCCAGCGCT GACGGCGCGT GGGGTGTTGT TGACCAATAC GCCCGATGTG
CTGACCGAGA CGACCGCCGA TCTGGTGTGG GCGCTGATCC TGGCGGCATC GCGGCGGGTT
GTCGAAGGTC ATCGGTTGAT CGCTGCCGGC GGATGGACGA CCTGGTCGCC AATGTTTATG
GTCGGGCAGG ACGTGCATGG CGCAACGCTT GGAATCGTTG GCGCGGGACG GATCGGTTCC
GCCGTGGCGC GACGCGCGGT TGGCTTCGGT ATGCCGATCC TGTACCACAA CCGGCGTCCA
TCACCCTCGC TGGAAGCGCA GATCGGCGCG ATCCCCGGCG CGGTTATTCG CTATGCGCCG
ACGCTGGATG ACCTGCTCAG CACTGCGGAT GTGGTGGTGG TGCTGGTTCC GCTGACGCCG
GAGACGCGCG GGATGTTCGG CGCGCGTGAG TTTGCGCTGA TGAAGCCGAC GTCGGTGTTC
GTCAATGCCT CACGCGGTCC GGTCGTCTGT GAAGCGGAAC TGATCGAGGC GCTGAAGCGC
GGTCGTCCAT GGGCAGCCGG TCTCGATGTG TTCGAGCACG AGCCAATCGG CGCTGATCAC
CCGCTGCTGG CGTTGCCCAA CGTGGTGTTG ACGCCGCATA TCGGCAGCGC CACAGTCGCC
ACCCGTACCA GGATGGCGGT GGTGGCTGCC ACAAACCTGG TGGCGGCGTT GACCGGTCAG
CCTGTACCGA ATCCGGTCAA TCGGGTTGAG GTGAAGGGTG AAGGTCGGGA CGGAGGAACG
TAG
 
Protein sequence
MKPRAYITRR LPQAAIDIVS AACETTLWDD EANPVPRETL LRAVADVDGI LTLLTDRVDT 
ELLAAAPRLK VVANMAVGYD NVDLPALTAR GVLLTNTPDV LTETTADLVW ALILAASRRV
VEGHRLIAAG GWTTWSPMFM VGQDVHGATL GIVGAGRIGS AVARRAVGFG MPILYHNRRP
SPSLEAQIGA IPGAVIRYAP TLDDLLSTAD VVVVLVPLTP ETRGMFGARE FALMKPTSVF
VNASRGPVVC EAELIEALKR GRPWAAGLDV FEHEPIGADH PLLALPNVVL TPHIGSATVA
TRTRMAVVAA TNLVAALTGQ PVPNPVNRVE VKGEGRDGGT