Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0194 |
Symbol | |
ID | 5207129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 239785 |
End bp | 240537 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640593824 |
Product | chromosome segregation and condensation protein ScpA |
Protein accession | YP_001274580 |
Protein GI | 148654375 |
COG category | [S] Function unknown |
COG ID | [COG1354] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0801589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00689338 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCGTCG ATCATCTCGA CTACACCATA ACTCTGCCGG TATTCGAGGG TCCGCTCGAG CTGCTGCTGC GCCTGATCGA GCGCGAGGAA CTGGATATTA CCAGCGTGGC GCTTGCGCAC GTCGCCGAAC AGTACCTTGC TCATGTGCGT TCAATGGAAG CGCCGGATCC GGCGTCGCTC TCGGCATTTC TGGTTGTGGC AGCGCGTTTG CTGCTGTTGA AATCGCGGGC ATTGCTGCCA CAACCGCCAG CGACCGATGA TGCGGCGCCA GACGACGATG ACGACGCACT GGTGCGTCAG TTGCAGGATT ATCAGCGCTT CCGCCGACTC GCTGCGCTGC TGCGCCTCTA TGAAGGTCGT CGCATGTATC TGCGGCTTGC CCCGCCTCCG GCGCCCCGCG CCGCGTCGCT CGACCATACG GTCGCCGACC TGATTGCTGC CATACAACGC CGCATGCAGT TGATGCTGCC ACTCGATCCG CCGCCTGTTG CGCTTCCCGC ACCGAAGATC GTCACAGTCG GCGATATGGT TGAGCGCATT CGAGCGCTTC TATCGGAACG TTCCTGGATC GCATTTGAAG AAATCACCTC GCTGACCGCC CGACGCATAG AGATCATCGT CGCATTCTGG GCGGTGCTGG AAATGTGGAA ACGCCGCGCG GTTACGGTCG AACAGACCGG TCTCTTTGGC GCGATTGTGA TCCGCCACGG ACCAGGGTTC GTTGCTGGTT GGGAGTTGGA GGTGGAGGGT TGA
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Protein sequence | MFVDHLDYTI TLPVFEGPLE LLLRLIEREE LDITSVALAH VAEQYLAHVR SMEAPDPASL SAFLVVAARL LLLKSRALLP QPPATDDAAP DDDDDALVRQ LQDYQRFRRL AALLRLYEGR RMYLRLAPPP APRAASLDHT VADLIAAIQR RMQLMLPLDP PPVALPAPKI VTVGDMVERI RALLSERSWI AFEEITSLTA RRIEIIVAFW AVLEMWKRRA VTVEQTGLFG AIVIRHGPGF VAGWELEVEG
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