Gene RoseRS_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0194 
Symbol 
ID5207129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp239785 
End bp240537 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content61% 
IMG OID640593824 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_001274580 
Protein GI148654375 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0801589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00689338 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTCGTCG ATCATCTCGA CTACACCATA ACTCTGCCGG TATTCGAGGG TCCGCTCGAG 
CTGCTGCTGC GCCTGATCGA GCGCGAGGAA CTGGATATTA CCAGCGTGGC GCTTGCGCAC
GTCGCCGAAC AGTACCTTGC TCATGTGCGT TCAATGGAAG CGCCGGATCC GGCGTCGCTC
TCGGCATTTC TGGTTGTGGC AGCGCGTTTG CTGCTGTTGA AATCGCGGGC ATTGCTGCCA
CAACCGCCAG CGACCGATGA TGCGGCGCCA GACGACGATG ACGACGCACT GGTGCGTCAG
TTGCAGGATT ATCAGCGCTT CCGCCGACTC GCTGCGCTGC TGCGCCTCTA TGAAGGTCGT
CGCATGTATC TGCGGCTTGC CCCGCCTCCG GCGCCCCGCG CCGCGTCGCT CGACCATACG
GTCGCCGACC TGATTGCTGC CATACAACGC CGCATGCAGT TGATGCTGCC ACTCGATCCG
CCGCCTGTTG CGCTTCCCGC ACCGAAGATC GTCACAGTCG GCGATATGGT TGAGCGCATT
CGAGCGCTTC TATCGGAACG TTCCTGGATC GCATTTGAAG AAATCACCTC GCTGACCGCC
CGACGCATAG AGATCATCGT CGCATTCTGG GCGGTGCTGG AAATGTGGAA ACGCCGCGCG
GTTACGGTCG AACAGACCGG TCTCTTTGGC GCGATTGTGA TCCGCCACGG ACCAGGGTTC
GTTGCTGGTT GGGAGTTGGA GGTGGAGGGT TGA
 
Protein sequence
MFVDHLDYTI TLPVFEGPLE LLLRLIEREE LDITSVALAH VAEQYLAHVR SMEAPDPASL 
SAFLVVAARL LLLKSRALLP QPPATDDAAP DDDDDALVRQ LQDYQRFRRL AALLRLYEGR
RMYLRLAPPP APRAASLDHT VADLIAAIQR RMQLMLPLDP PPVALPAPKI VTVGDMVERI
RALLSERSWI AFEEITSLTA RRIEIIVAFW AVLEMWKRRA VTVEQTGLFG AIVIRHGPGF
VAGWELEVEG