Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0192 |
Symbol | |
ID | 5207127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 238834 |
End bp | 239115 |
Gene Length | 282 bp |
Protein Length | 93 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640593822 |
Product | transcriptional coactivator/pterin dehydratase |
Protein accession | YP_001274578 |
Protein GI | 148654373 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2154] Pterin-4a-carbinolamine dehydratase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00109054 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00158686 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGCAACTC GACTGAGCGA TGCCGAGATC GAAGAGCGCC TCGGCGATCT GACCGGATGG ACACGCCAGG GCAACGAGAT CCGGAAGACA TTTCAACTTC CCTCGTTCCC TTCTGCAATT GCATTTGTTG TCAACGTCGC CTTTCTGGCT GAGGCTGCTG GACACCATCC CGATATCGAT ATTCGCTGGC GTAAGGTGAC GCTAAGCCTG ACCACCCACG ACGCTGGCGG CTTAACGCAG AAGGACTTCG ATCTGGCCAC CCAGATCGAT GAGATTATGT AG
|
Protein sequence | MATRLSDAEI EERLGDLTGW TRQGNEIRKT FQLPSFPSAI AFVVNVAFLA EAAGHHPDID IRWRKVTLSL TTHDAGGLTQ KDFDLATQID EIM
|
| |