| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0190 |
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| Symbol | pyrF |
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| ID | 5207125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 236131 |
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| End bp | 236949 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640593820 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001274576 |
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| Protein GI | 148654371 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000350723 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00632845 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCTTTC GTGAAACAGT CTGTGCGACT GCCCGACGCA ACCGGAGCTG GTTGTGCATT
GGGTTAGACC CGGAGCCAAT GCGGATGCCG GTGCATCTGC CGGCGGACGC GGAGGGGGTG
TACGCTTTTT GCGCTGCCAT TATGGACGCG ACATCGGATC TCGTGTGCGC GTTCAAACCC
AATATTGCCT TTTTCGAGGC GTTCGGCGCC GCCGGATGGT CGGCGCTCGA ACGGCTCATC
CGGTTGCGCC CGGGGCCACC GATCATTCTC GATGCCAAAC GCGGCGATAT TGGTTCCACA
GCGGAAGCGT ATGCGCGCGC CGCTTTTGAG GTGCTCGACG CCGATGCAGT GACGGTGAAT
CCGTATCTGG GAGGCGATGC GCTCGAACCA TTCTTGCGGC ATTCCCAACG GGGATGTTTC
ATTCTCTGCA AAACATCGAA CCCTGGCAGC CACGATCTGC AGGATATGCG CCTGGCGGAT
GGACGCCCGC TGTATCTGGC GGTTGCGGAG ATGGCGCGCG ACCGCTGGAA TATGCACGGC
AATACAGGGC TGGTGGTCGG CGCAACACAT CCGACTGCGA TCACGGAGGT TCGCCGCGCC
TGCCCGGATA TGTTGCTGCT TGTGCCGGGA ATCGGGGCGC AGGGTGGCGA TCTGGACACA
ACGGTGCGCG CCGCCGCAGC GGTCGATGAA CCCCTGATGA TGATCAACGT CTCGCGCACG
GTGTTGTACG CCGACCGCGG AACGAACTTT GCTGCGGCGG CGCGCACGAC GGCGCTTCGC
CTGCGCGATG CCATCAATGC CGCGCTGATG GCGCGCTGA
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| Protein sequence | MTFRETVCAT ARRNRSWLCI GLDPEPMRMP VHLPADAEGV YAFCAAIMDA TSDLVCAFKP
NIAFFEAFGA AGWSALERLI RLRPGPPIIL DAKRGDIGST AEAYARAAFE VLDADAVTVN
PYLGGDALEP FLRHSQRGCF ILCKTSNPGS HDLQDMRLAD GRPLYLAVAE MARDRWNMHG
NTGLVVGATH PTAITEVRRA CPDMLLLVPG IGAQGGDLDT TVRAAAAVDE PLMMINVSRT
VLYADRGTNF AAAARTTALR LRDAINAALM AR
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