| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0189 |
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| Symbol | smpB |
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| ID | 5207124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 235561 |
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| End bp | 236037 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640593819 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_001274575 |
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| Protein GI | 148654370 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000399646 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0189188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCGGG GGAACGATAT TGAGCGCGTG GTTGCCGACA ATCGCAAGGC GCGCCACGAT
TATTTCATCG AAGAGACGTA TGAAGCGGGG ATTGCGCTGA CCGGCAGTGA GATCAAGTCG
ATCCGCGCCG GGCAGGTGAA CCTGCGTGGC GGCTATGTGC GCATCGTCGA TGGCGAGGCA
TGGCTCTACG ATGTGCATAT TGCGCCCTAC GAGCAATCCG GGGCGTACTT CAACCACGAG
CCGACGCGAC CGCGGAAGTT GCTGTTGCAT CGACGCGAGA TTTCCCGCAT TGCCGGGCAG
GTCGAACGGC AGGGATACAC GCTCGTGCCG CTCCGGCTGT ATCTGCGCGG GCGGCGCGCA
AAAGTCGAAA TCGGGCTGGC GCGCGGCAAG AAACTCTACG ACAAACGCGA CGACATCGCG
CGCCGTGAAG CGCGCCGCGA CATCGAGCGC GCCCTCAAAG AACGCACGCG CCGCTGA
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| Protein sequence | MARGNDIERV VADNRKARHD YFIEETYEAG IALTGSEIKS IRAGQVNLRG GYVRIVDGEA
WLYDVHIAPY EQSGAYFNHE PTRPRKLLLH RREISRIAGQ VERQGYTLVP LRLYLRGRRA
KVEIGLARGK KLYDKRDDIA RREARRDIER ALKERTRR
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