Gene RoseRS_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0181 
Symbol 
ID5207116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp228365 
End bp229516 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content61% 
IMG OID640593811 
ProductAAA family ATPase 
Protein accessionYP_001274567 
Protein GI148654362 
COG category[R] General function prediction only 
COG ID[COG1373] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0254129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTTC CAAGGCCCGC CGTTATCGCC CACATCAACC GTCAGATGGC GATCCATCCA 
ATTGTTGCCC TGTTGGGTCC ACGGCAATGC GGCAAGACCA CCGTGGCACG GATGATCGCT
GAGCAGCAAC CGTCCACGTA CTTCGATCTG GAAAATCCGG TGGACGTGCG TCGGCTCTCG
GTGCCGCTGA CCGTGCTTGA AGCGCTCACC GGCCTGGTCA TCATCGATGA AGTACAGCGA
CAGCCCCCTT TGTTCGAGCT GCTCCGGGTG CTGGTAGACC GTCCGCACCA TTCCGCTCGC
TTTCTGATCT CAGGTTCTGC ATCGCCCAAT CTTGTTCGCA GCGTGTCGGA ATCGCTGGCC
GGGCGCATCG GGTTTGTTGA TCTCTCCGGC TTCGACCTGG CCGAAGTCGG TCCTGCGCAA
CGTGATCGTC TGTGGCTCCG CGGCGGCTTC CCCAGGTCGT TCCTGGCTGA CGATGACCGG
AGCAGTCTGG CGTGGCGCGA GGCATTCATT CGCACCTTTC TGGAGCGGGA CATCCCGCAA
CTGGGCATCA CCATTCCCGC CGAAACCCTG CGGCGCTTCT GGACAATGAT CGCCCACTAC
CATGGACAGA TATGGAACGC TGCGGAGTTC GCCCGATCGT TGGGAACGTC CGAAGCCACC
GCGCGTCGTT ATCTGGACAT TCTCGTTGGC GCATATATGG TGCGGCTGCT GCCTCCGTGG
TTCGAGAACA TCGGCAAGCG CCAGGTCAAA TCGCCCAAGG TGTACATCCG CGACACTGGC
ATCCTGCACG GTTTGTTGGG GCTAGAGACG CTGGCAGAGG TCCAGTCCCA TCCCAGGCTG
GGCGCCTCGT GGGAGGGATT CGCTATCGAG CAGATCATCG GCTTGCTGGG CACACGCGAT
GCGTATTTCT GGGCCACTCA CAGCGGCGCC GAACTCGATC TGCTGGTGCA TCTGCGGGGC
AGGCGGTATG GCTTCGAGAT CAAATACGCC GACGCGCCCG GCGCCAGTCG TTCGATGCAC
GTGGCTCTGC ACGATCTTGG GCTGGATCAC CTCTGGATCA TCTATCCGGG GAAGCAAGAA
TACGCCCTTG ATGCCCGAAT CACCGTCCTG CCCATGGAAG CGCTGCCTGA CCTGGCGGCC
ACGTTGCGCT GA
 
Protein sequence
MLVPRPAVIA HINRQMAIHP IVALLGPRQC GKTTVARMIA EQQPSTYFDL ENPVDVRRLS 
VPLTVLEALT GLVIIDEVQR QPPLFELLRV LVDRPHHSAR FLISGSASPN LVRSVSESLA
GRIGFVDLSG FDLAEVGPAQ RDRLWLRGGF PRSFLADDDR SSLAWREAFI RTFLERDIPQ
LGITIPAETL RRFWTMIAHY HGQIWNAAEF ARSLGTSEAT ARRYLDILVG AYMVRLLPPW
FENIGKRQVK SPKVYIRDTG ILHGLLGLET LAEVQSHPRL GASWEGFAIE QIIGLLGTRD
AYFWATHSGA ELDLLVHLRG RRYGFEIKYA DAPGASRSMH VALHDLGLDH LWIIYPGKQE
YALDARITVL PMEALPDLAA TLR