| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0141 |
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| Symbol | |
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| ID | 5207073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 176972 |
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| End bp | 178549 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640593770 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_001274529 |
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| Protein GI | 148654324 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCTG TGACCGTTCA GGATGTCTTG CGCCTGGCGT TGCCAGACGG TTCAGAAGTC
GTTGCTGGCA ATGCCGGTCT CAACCACCAG GTGAGTTGGG TGACGACGCC GCGCGCAACG
CCGCCGGCCT TTACCAATCT ACGCGGCGGC GAATGTGTGG TCGTGGCGAC CAGTGTGCTG
CGCGCGCTCG ATGAACGCCT GACGCTCGCC AATCTGATCG AGCGCCTGGC GCAGGTGCCT
GTGGCAGCCA TTGCGGTGCA GGGCGACATC CCCGATCCGG CGCACACGAC TGCTGAAAGC
CTGCGTCTGC CGCTCATTCG ACTTCCCGAC TCCTGCGACA TTCGGGAAGT CGAACGCGAG
GTTCAGCGTC TGATCAGCGA CTATGATGCG CAGATCGAAC GCCGCGCCGC TCAGCTCGGC
TCGGTGCTGA CGCAGCGTTC GCTGGCAGGC GCTGGAGTCA ACGGGTTGCT GGAAACGCTC
GTCGAGCGCA CCGGACGCAG CCTGGCGTAC TACAGTTCAG CCGGAGAGGT GCGCGCGTTA
CGGGCGCGCG GACCGGCGCG CGTCGCCTTG CAGACGCTGC AACCGCGCAC GACCGGCGCA
GTCGCACATT TGGGGCAGCA TATCTGGGTG CAGCAGATCG GGCAGATGGC ATCCGGCGAT
GCGGCAGGGC GCAACTTTGG CTACCTGGCG CTCTGCGGCG ACACGCTCGA CGACTGGGAT
CGATTGGCGG CGCAGCAGGG CGCATCGGCG CTGGCGCTGG AACTGGCAAA AGAACAGGCG
GTGCTGGCTG CTGAAGAGCG TCTGCGCGGC GATTTTGTGC AGGCAGTGCT CGTCGGCGCC
GCAACCGACG ACAAAACGCT GGTGCAACGC GGGCGTGAAC TGGGCTACGA CCTGCGGCAA
CCGCACGTCG CTCTGCTCTG CGGCATCGTC GATGGAGATG ATCGCACAAT TGCGCGGATT
GCCGATGCGC TCAGTGCCGC GCTCAACGCT CTTGGGGTCG CCGCACCGAT GATGCGTCGG
ATCGATGATG TGCTCTGCTA CATTCCAGCG GTCAGTCGTG GGCGACGGTT CCACGAAGTG
GCGGATCTGC TGCGCCAGCG TTTGGTGAAC GATATTCCCA ATGTGCTGGT CGCAATCGGG
CGGGAGGCGC CGACGCTCAC CGCCTGGTCG CGCTCACTGC GCGAAGCCGA ACAGGCGCTC
CTGATCGGGC GGGAACTGGT GGGCAATGGG CGCGTGCTCG ACTTCAGCGA TCTGGGGGTG
TACCGCCTGC TCCTGCTGCT GCGCGAGTCG CCCGAACTGT GGGAGTTTTA CCGCAGTACG
CTTGCCACGC TCGTCGAGTA TGACCGTGAC CAGCACGGTG AGTTGCTGAA AACCCTCGAA
GCGTTCTTCG AGCACAACGG CAACCTGGCG CGCACCGCCG ATGCGCTGCA CATTCACCGC
AACACCCTCC TCTACCGCCT GACACGGATC AAAGAGATCA GCGGGCGCGA CCCGGATGTC
GCCGAAGATC GCCTGGCGCT GTGGCTGGCG CTCAAGGCGC ACCGCGTCCT CAAGACGATT
ACGGAACCGG TGGGATAG
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| Protein sequence | MPPVTVQDVL RLALPDGSEV VAGNAGLNHQ VSWVTTPRAT PPAFTNLRGG ECVVVATSVL
RALDERLTLA NLIERLAQVP VAAIAVQGDI PDPAHTTAES LRLPLIRLPD SCDIREVERE
VQRLISDYDA QIERRAAQLG SVLTQRSLAG AGVNGLLETL VERTGRSLAY YSSAGEVRAL
RARGPARVAL QTLQPRTTGA VAHLGQHIWV QQIGQMASGD AAGRNFGYLA LCGDTLDDWD
RLAAQQGASA LALELAKEQA VLAAEERLRG DFVQAVLVGA ATDDKTLVQR GRELGYDLRQ
PHVALLCGIV DGDDRTIARI ADALSAALNA LGVAAPMMRR IDDVLCYIPA VSRGRRFHEV
ADLLRQRLVN DIPNVLVAIG REAPTLTAWS RSLREAEQAL LIGRELVGNG RVLDFSDLGV
YRLLLLLRES PELWEFYRST LATLVEYDRD QHGELLKTLE AFFEHNGNLA RTADALHIHR
NTLLYRLTRI KEISGRDPDV AEDRLALWLA LKAHRVLKTI TEPVG
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