Gene RoseRS_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0140 
Symbol 
ID5207072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp175564 
End bp176919 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content61% 
IMG OID640593769 
Productglucose/sorbosone dehydrogenase-like protein 
Protein accessionYP_001274528 
Protein GI148654323 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.5933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTTT TTTCGATCCT GTTCGTTTTC CTCATTGTGG CGCTCGCTGG TTGCAATTCG 
ATACCTGCCC GCACGCCGCT CGCCGACCGA CCGGCAGGGA CGTTGATCCC AACCGCAGCG
ACCACGCCGG TACCGCCGGC ACAGCCGACT GCGGCGACCA CGCCCGTGCC GCCTGGTCAA
CCGACGGCGG CGACGACGCC TGTGCCGCCT GGTCAACCGA CATCCATTCC GCCGACGCCT
GATGCCGCAC CATCGGCGCC GGTTGCCACC GCACCGCCTG CGCCGCAACC GGCTGGGGCA
TGGCCCCCCA CGATCGCGCT GCAACACATA GCCGATGGAT TTGATCGTCC GCTGCACATA
ACGCACGCTG GCGACGGCAG CGGACGACTC TTTGTGGTGG AGAAGGTCGG GCGCATCAGG
ATCGTGCGCG ACGGACAGGT GTTGCCTGAA CCATTCCTGG ATATTACCGA TCGGGTAGGA
TCGCGCGCCA ATGAGCAGGG ATTGCTGAGC GTCGCATTTC ATCCGCGCTA CCGCGAGAAT
GGCTGGCTCT TCGTCAACTA CACCGATAAC GATGGCGACA CCGTCGTCTC ACGGTTCGAG
GCGACCGGCG ACCGCGCCGA TCCGGTCAGT GAACAGGTGG TGTTGACGAT TGGACAACCC
TTTTCCAATC ACAATGGTGG ATTGATTGTG TTTGGTCCTG ACGGAATGCT CTATATTGGG
ATGGGTGATG GCGGCAGCGC CGGGGATCCG CTTGGTGCAG GGCAGGATCG TTCGACGCTG
CTTGGAAAGA TACTGCGCAT CAATGTCGAA GATCTCCCGT ACACCATTCC CCCCGACAAT
CCCTGGGCGG ATGGCGTTGA TGGTCGGCAG GAGAACTGGG TAATCGGCGT GCGCAATCCG
TGGCGTTTCT CGTTCGACCG TGCAACCGGC GATCTGTTTA TTGCCGATGT CGGGCAGAAC
CGGCTCGAAG AGGTGCACCT GCTGCGCGCC GGGCGGATTG CGGGTGCGAA CCTGGGCTGG
AATGTGATGG AAGGAGATGA GTGCTTTCGC CGCAACGACT GTAACCGCGA CGCTTTCGAT
CTGCCGATCG ACGTCTATCC GCATAGCCTG GGGTGCTCCG TTACCGGCGG ACATGTCTAC
CGTGGCGCGG CTTTCCCCGC CTTGCAGGGA GTCTATGTCT TCGGCGATTT TTGCAGCGGG
CGCATCTGGG GGTTACGTCC GTCTGGTGCG GAGTGGGAGC GTGTCGAACT GTTGCAATCC
GGTTTGCAGA TTGCTTCATT CGGCGAAGAC GAAGCCGGTG AATTGTACGT CGCCGGGTAT
AATAATGGCG CCCTGTACCG GATCGTTGTA GAATAG
 
Protein sequence
MRLFSILFVF LIVALAGCNS IPARTPLADR PAGTLIPTAA TTPVPPAQPT AATTPVPPGQ 
PTAATTPVPP GQPTSIPPTP DAAPSAPVAT APPAPQPAGA WPPTIALQHI ADGFDRPLHI
THAGDGSGRL FVVEKVGRIR IVRDGQVLPE PFLDITDRVG SRANEQGLLS VAFHPRYREN
GWLFVNYTDN DGDTVVSRFE ATGDRADPVS EQVVLTIGQP FSNHNGGLIV FGPDGMLYIG
MGDGGSAGDP LGAGQDRSTL LGKILRINVE DLPYTIPPDN PWADGVDGRQ ENWVIGVRNP
WRFSFDRATG DLFIADVGQN RLEEVHLLRA GRIAGANLGW NVMEGDECFR RNDCNRDAFD
LPIDVYPHSL GCSVTGGHVY RGAAFPALQG VYVFGDFCSG RIWGLRPSGA EWERVELLQS
GLQIASFGED EAGELYVAGY NNGALYRIVV E