| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0138 |
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| Symbol | |
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| ID | 5207070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 172112 |
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| End bp | 174310 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640593767 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_001274526 |
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| Protein GI | 148654321 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACTT TCACCCTGCG TTCCACCCGC CACGCACTGA TTGTGACCCT GGCGGAACTC
GAACTTGAGT TCTCTCTCGA CGATGGCGGG TTACGGGCAC TGCGCCGACC GGGCGGACCG
GACGTGATCG GGCGTGGCGC ACCGCATACG GGCGTTGATG TCTCGCTCGC GGAAACCGGC
TGGTTGACCC AGCGTTCGTT TGCTCGCTAT CTCAACCATT TTCTCTACGA TATTCCTGGC
GGCGTCGAAA TCGTGATCGT CGTCGGTCTC GGTCCACTGA AGATCTACGA CCGCTACCGT
GCAGTCGGTT CGTTCATAAC ACGCCGTATC AGTATCGAAA ATACCGGCGA CGATGAACTG
GCGTTGTGTG GAGTGCGCCT GACGATCAGC AACGCGTGCG TCGGCATGCC GGAACGCTGT
CGCTTCGAAG CGCCGGCAAA TGTGATCCGT CCCCGTCTGC CGATTGCTCG CCTGCGCGGT
GACCCGCACC ACCGTCACTG GTCGGACACA TCGGCGCTGG AGATCCCGGC GTTTGCTCTG
GCGCCCGCCG ATGCGCCCGG TTTGCTCGCC CTGCACAACG ACATGGTTGG CGAAACGCTG
GCGTGCTGGT ACAAAGACCC CTCCAACGCG GCGCGTCCGC GGGTGGAAAG TGATGGCAAC
GCTGTCACAC TGTTTCACGA CATTCGCATC GCGGAGCGCC TGCGGGTTGA GGTGGCGCTA
TCCGTTGGGG TGCAGGCGCT GCTGCTGGAG CGCGCACCCT GGCACAACGC CCTGCCACGG
ATCCATCAGG TGATGACGCG CAGCCGGGCG AACCCGGCAA CACCGCCCGA ATGGGTGGCG
GACGCAGCCG TGTTTGTGAC GCATCCGGCG CATTTCGGGG GCGCCTGTGG ATTAATCGAG
GCGCTCGATG CCATTCAGCG CCTGGGTTGC ACCGCACTCT GCCTCCTGCC GGTTCACGAT
ATTGCCGCCC CACGTCAGTA CACGGAAGAA TGGTCTCCGG CGCAACCGGA GGACCTCTAT
GCGCTACGCT CGTTTGCGAT GCTGGCGCCA GAGATCGGAG GGATCGAAGG ATTGCGCGAT
GTTGTGGCTG CCGCTCATGC GCGCGGGATG CGGGTGATCC TCGATCTGCC CCTCTCCGGC
TGCGCCGCTG ACTCGCCCTA CGTATCAGAA CATCCAGACT GGTTCTGCCT GGATCAGAGC
GGACAGTTCA TTCGCTTTGC GGGGGAGGTC GATACCTTCT ATTTTGACTG GCGCAATGAT
GCCCTGCGCA CCTATGCCGT CGGTGAGCTG ATGATGCTGA TGGAACAGAG CGGTATCGAC
GGTTTTCGCG TGCTGGTTGC ACGCGATGTG CCGCCGGGAT GGCCCCTTGG CGCAGCGATC
AGCGGCGGCA GCAGTATGGG CGTGGTGCGT CTGATCGAGA TGTTGTACGC CGCAATGCGC
CAGGTTCGAC CCGACGCGGC GCTGGTCACC GATCTGGCAG GACCGATGCT TGCGCCCTGT
CGGGATCTGA TCATCGACAA ATCGGCGCAC CATATGTTTA CCTATCTGGC AATTGGAACG
CTTGGCGCAG CTGAGATGCA GGAGTGGCTG ATCGACAACC TGGCGATCGG TGATTCGGGA
GGGCTGCGTG CGTGTTTCAC CGAAAGCCAT CATTCGTGCG TGAGCAATCC GCTGGCTGAT
GTACTCCGGG GTTCACGCCC GGCACGCATG ATCCTTGCTG GCATGGTAGG GTGCGGCTAC
GTGCCGTTGA TCCGCGCCGG TCAGGAACAG GAACCCGGCG ACCGTGACGG TATCACCCGC
CTGCTCCACG CACGGGCGCG CAGCGTTGCG TTGCGCCGCG GCGCAATCGA TCCGAACGGT
GTGCGCTGCG ACGACCCGGC AGTCTTTACG GTGCTGCGAC GACACCCGGA AGAGTGTGTT
GTCACGCTCC TGAACGTCAG TCCCCTCCAT CGTCAGGTGA CGCTTGCGTT GCCGCTTGCA
GACCTGCCGG ATGGCGACTG CCTCATTGAT GACCTGCTCG ATGGCGATCC GCCGCAGAAC
TCAACGGATG CGCTTCGGCG CGACGATCTG GCGGCATTGT CGATCACGCT GGCGCCATTC
GCCGCGCGCA TGCTGGCGTT GCGTCCCGCA CCGCTGCATC CCGACAACGG CATTGTCGAT
CACACCGTTC ATTCGGATAA CGTATCACGA GAGTCGTAG
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| Protein sequence | MATFTLRSTR HALIVTLAEL ELEFSLDDGG LRALRRPGGP DVIGRGAPHT GVDVSLAETG
WLTQRSFARY LNHFLYDIPG GVEIVIVVGL GPLKIYDRYR AVGSFITRRI SIENTGDDEL
ALCGVRLTIS NACVGMPERC RFEAPANVIR PRLPIARLRG DPHHRHWSDT SALEIPAFAL
APADAPGLLA LHNDMVGETL ACWYKDPSNA ARPRVESDGN AVTLFHDIRI AERLRVEVAL
SVGVQALLLE RAPWHNALPR IHQVMTRSRA NPATPPEWVA DAAVFVTHPA HFGGACGLIE
ALDAIQRLGC TALCLLPVHD IAAPRQYTEE WSPAQPEDLY ALRSFAMLAP EIGGIEGLRD
VVAAAHARGM RVILDLPLSG CAADSPYVSE HPDWFCLDQS GQFIRFAGEV DTFYFDWRND
ALRTYAVGEL MMLMEQSGID GFRVLVARDV PPGWPLGAAI SGGSSMGVVR LIEMLYAAMR
QVRPDAALVT DLAGPMLAPC RDLIIDKSAH HMFTYLAIGT LGAAEMQEWL IDNLAIGDSG
GLRACFTESH HSCVSNPLAD VLRGSRPARM ILAGMVGCGY VPLIRAGQEQ EPGDRDGITR
LLHARARSVA LRRGAIDPNG VRCDDPAVFT VLRRHPEECV VTLLNVSPLH RQVTLALPLA
DLPDGDCLID DLLDGDPPQN STDALRRDDL AALSITLAPF AARMLALRPA PLHPDNGIVD
HTVHSDNVSR ES
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