Gene RoseRS_0137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0137 
Symbol 
ID5207069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp170760 
End bp172037 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content62% 
IMG OID640593766 
Productamine oxidase 
Protein accessionYP_001274525 
Protein GI148654320 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGTGC TGATTGTTGG TGCAGGGCTT GCAGGGTTGA CCTGTGGCCG CATACTCGAC 
TCGCTTGGGG TAAATGTCAC TGTTGTTGAA GCCGGTGATG GCATCGGCGG GCGCGTGCGC
TCCGACTACG CCGACGGTTT CACGTTCGAC CGGGGGTTTC AGGTCTTATT CGAGGCGTAC
CCGGCGGCGC GCCGCCATCT TGATATGGAA GGGTTGCATC TGCGGCGTTT TGATCCGGGC
GCGATCATTT GTCTCCATGG TAGACGTTTT GTTCTGACCG ATCCATTGCG TGATCCGACG
GCAGCCATCG ATGCCGCGCT CGCTCCGATT GTCCCGCCGT TCGATAAATT GCGCATCCTG
CTGCTCGCAC AGCGTCTGCG CCGTCAGCCA ATCGATGCAG TGCTGGCAGG CGATGACGAA
ACAACGCTGG CGTATCTCCG GCGCTGCGGC TTGAGCGAAC AGACAATCAA CGTTTTCTTT
CGACCGTTCT ACGGCGGCAT TTTTCTCGAC CGCAGCCTGC GTACCAGCGC CAAATGCTTC
CGGTTCGACT TCAAGATGCT CAGTGAGGGC GCAGCAGCGC TGCCGGCGCA TGGCATGGGC
GCAATTGCAG AACAACTTGG CACCCCGCTG CGCGAACGCG GTCTAATCCG ATTGCACGCT
CCGGTCACCG CACTCATCGA CTCCAGCGGG CGGGTGACCG GCGTGCGACT GGAATCAGGG
GAAGAACTGT CTGCCGATGC GGTGGTGGTC GCCACGCCAG CGCCGGAAGC GGCGCGGTTG
AGCGGTTTGC CAATGCCGCA GGGCGCGTTG CAGACGATCA CGCTCTACTT CGGCGGCGAT
CGACCTGTCT ATCAGGGACG CAAGATCGTC CTCAACGCCG CTTCTGATGC GCTGGTCAAT
AACGCGCAGA TGCTCAGCAA TGTCGCGCCG GAGTACGCCC CGCCCGGTCG TCACCTGCTC
AGCGTTTCGG TGCTTGGCGC GAGTTCGCTG AGTGATGAGG ATCTCTCCCG CGCGGCGCTT
GCCGATCTGC GGCGCATGTT TGCCGGTGAT ACCGCTGCGC TGGCGGCGCT CGAAGGGTAT
CAACCGCTGC GCATCTATCG CCTTTCCTAT GCACAGTTTC CCCAGGCGCC GGGCATTCAT
CCTCTCCTGC CCGACAATCG GAGCGGGCGA CCGGGACTGT ACTTCGCGGG TGAGTTTACC
GAGGCGAGCA GCCTGAATGC TGCGATGATC AGCGGTGAAA AGTGTGCAGC TGCGGTGATG
GAAGACCGGC AGGCATAA
 
Protein sequence
MHVLIVGAGL AGLTCGRILD SLGVNVTVVE AGDGIGGRVR SDYADGFTFD RGFQVLFEAY 
PAARRHLDME GLHLRRFDPG AIICLHGRRF VLTDPLRDPT AAIDAALAPI VPPFDKLRIL
LLAQRLRRQP IDAVLAGDDE TTLAYLRRCG LSEQTINVFF RPFYGGIFLD RSLRTSAKCF
RFDFKMLSEG AAALPAHGMG AIAEQLGTPL RERGLIRLHA PVTALIDSSG RVTGVRLESG
EELSADAVVV ATPAPEAARL SGLPMPQGAL QTITLYFGGD RPVYQGRKIV LNAASDALVN
NAQMLSNVAP EYAPPGRHLL SVSVLGASSL SDEDLSRAAL ADLRRMFAGD TAALAALEGY
QPLRIYRLSY AQFPQAPGIH PLLPDNRSGR PGLYFAGEFT EASSLNAAMI SGEKCAAAVM
EDRQA