| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0129 |
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| Symbol | |
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| ID | 5207062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 157914 |
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| End bp | 160628 |
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| Gene Length | 2715 bp |
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| Protein Length | 904 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640593760 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001274519 |
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| Protein GI | 148654314 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00525564 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACGC CCGATACGCA GCAACTGCCT GAGATGGCAA AAGCCTACGA AGCGCAGCGC
GTGGAACAGC GCCTCTACGC TTGGTGGGAG CGTAGCGGCT TCTTTACGCC GCCTGAGACG
TTCGACCGCC CGCCGTTTGT GATCTCGATG CCGCCGCCCA ATGTGACCGG TGAACTGCAC
ATGGGGCACG CGATGTTCGT GGCCATCGAG GATGTGTTGA CGCGCTGGCA TCGAATGCTC
GGCGATCCGA CCCTCTGGTT GCCCGGAACT GACCACGCCG GTATTGCGAC GCAGTTGCAG
GTCGAGCGTT TGTTGCAGAG TGAAGGCGTC ACGCGCCAGC AGATCGGTCG TGAGGCGTTC
CTGCGCCGTA CCTGGGAGTG GAAAGAGAAG TATGGCGGCG AAATCACCCG TCAACTGCGG
CGCCTGGGCG CATCGTGCGA CTGGACGCGT GAACGGTTCA CGCTCGACCC GATGCTCTCG
CGCGCTGTGC GTGCGGCGTT CAAGCGGCTG TACGACGATG GCCTGATCTA CCGCGGCTAC
CGGATGGTCA ACTGGTCGCC GAACCTGCAA ACCGCCGTGA GCGATCTCGA AGTCGAGTAC
GAGGAACGCG ACGTGCAGAT GTATCACGTC CGTTATCCGC TCGCCGATGA TGGCTGGCAT
CCCGCTGCGT GGGGCAGCGG TCGCTGGGCG TCTGGCGCGC GGGAGTTCAT CACCGTCGCC
ACCACCCGCC CTGAAACGAT CATGGGCGAT ACTGCCGTGG CGGTGAACCC CGATGATCCA
CGCTATCGCC ATCTGATCGG GCGAACGGTC GTGCTTCCGG CGATAGGGCG CCTGATCCCG
ATCATCGCCG ATGAGTATGC CGATCCGCAG TTCGGTACCG GCGCGGTGAA AATTACGCCG
GCGCACGACC CGAACGACTA TCTGGTGGGT CAGCGGCACA ATCTGCCGAT GATCAACATC
ATGAATCCCG ATGCGACCCT CAACGCCGAA GCCGGTCCCT ACGCCGGTCT CGACCGCTTC
GAGGCGCGGC AGCGCCTGCT CGACGACCTG GCGCGCGAAG GGTTGCTGGT CGAGGCGCGT
CCGCACCGGA TGTCGGTGGG TATCAGTCAG CGCGGCGGTG AAGTCGTCGA ACCGCTCCTC
AGCGAACAGT GGTTCGTGCG CGCCAGACCG CTGGCAGACC TGGCGCTTGC GGCGGTGCGC
GAAGGACGCA CCCGCATCGT GCCGGAACGC TTCGAGAAGG TCTTCTTCCA CTGGCTGGAA
AACATCCAGG ACTGGTGCAT CAGCCGGCAA CTCTGGTGGG GGCACCGGAT ACCGGTCTGG
TATACGCCCG ACGGTCAGAT GATCGTCCCC GGTCCCGACG ACCCCGATCC GCAGGGTGAG
GGGCTTGTGC AAGACCCCGA TGTGCTCGAT ACCTGGTTCT CCAGCGCCCT CTGGCCCTTC
TCGACCCTGG GTTGGCCCGA CGATACGCCC GATATGCGGC GCTTCTACCC GACGAGCGTG
ATGGAGACCG GGTACGACAT CCTGTTCTTC TGGGTGGCGC GCATGATGAT GATGGGGTGC
TACCTGACCG GCAAGACCCC CTTCCACACC GTGTATCTCC ACGGGTTGGT GCGCGACAAA
GATGGTCGCA AGATGTCGAA GACCTACGGG AATGTGGTGA ACCCGCTCGA TGTGATCGAG
CAGCACGGCG CCGATGCGTT GCGGTTCATG CTGGCAACCA GCAGTTCACC CGGTCAGGAT
CTGAACCTCA ACCCGGAGCG CATCGAGGCG GCGCGCAATT TCGCCAACAA GACGTGGAAT
ATCGCCCGGT TTGTGCTGTC GAAACTGGAT GCGCACACGC CCCCCGGCGA TCCCCGACCG
GCGACGCTGG CTGACCGCTG GATTCTGTCG CGCTACCATC GCCTGGTGAC CGATGTTGAT
CGCCTGATGC GGTCGTACAA TTTTGGCGAA GCCGGGCGGA GCATCCAGGA GTTCCTCTGG
AGCGAATTTG CCGACTGGTA TGTCGAAGTC GCCAAGGTGC AATTTGAACA GGATGCCCTC
CAGGAATCGA CGCGCGCCGT GCTCTACACG ACGCTGGAAG GCGCTCTGCG CCTGCTCCAC
CCCTTCATGC CGTTCGTGAC CGAGGAGACC TGGCAGTATC TGGTGCGCAA TTATCGGACT
GATGCAACCC CGGCGTCGAT CATGATTGCG CCGTATCCGC AACCGGATGC AGCCTGGATC
GACGATGGCA TCGAACGGGA GTGGGCGCTC GTCCAGGCGC TGATCACCGG CATCCGCAAC
ATTCGGACCG AGTACAAAGT CGAGCCGGCG CGGTTGATCG CCGCCACCAT TGTGGCAGGC
GCGCAGACGC CGCTGATCGA AGCGCAGCGC GCCGTGATCG CGCGCCTGGC GCGGATCGCC
GACGACCAGT TGACGATTGG TGCGGCGATC GATCAACGCC CCGCGAATGC CGCAACCCTC
GTCATCGGTT CCGTCGAGGC ATATCTGCCG CTCGCCGGCA TGATCGATCT GGAAGCCGAG
CGCGCGCGCC TGCTCAAGGA TCTGGAGGCC GCTCTGGCTG AGGCAGCGCG ACGCGAAGCG
CGACTGGCTA CCCCTGGTTT CGTTGAAAAG GCGCCGGCGA CAGTGGTGCA ACGCGAACGC
GACGGCCTGG CAGCTGTGCG CGAAACCATT GCCCGTCTGC AAGATCGCCT GGCGCAGCAA
GGATTCCATC CATGA
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| Protein sequence | MDTPDTQQLP EMAKAYEAQR VEQRLYAWWE RSGFFTPPET FDRPPFVISM PPPNVTGELH
MGHAMFVAIE DVLTRWHRML GDPTLWLPGT DHAGIATQLQ VERLLQSEGV TRQQIGREAF
LRRTWEWKEK YGGEITRQLR RLGASCDWTR ERFTLDPMLS RAVRAAFKRL YDDGLIYRGY
RMVNWSPNLQ TAVSDLEVEY EERDVQMYHV RYPLADDGWH PAAWGSGRWA SGAREFITVA
TTRPETIMGD TAVAVNPDDP RYRHLIGRTV VLPAIGRLIP IIADEYADPQ FGTGAVKITP
AHDPNDYLVG QRHNLPMINI MNPDATLNAE AGPYAGLDRF EARQRLLDDL AREGLLVEAR
PHRMSVGISQ RGGEVVEPLL SEQWFVRARP LADLALAAVR EGRTRIVPER FEKVFFHWLE
NIQDWCISRQ LWWGHRIPVW YTPDGQMIVP GPDDPDPQGE GLVQDPDVLD TWFSSALWPF
STLGWPDDTP DMRRFYPTSV METGYDILFF WVARMMMMGC YLTGKTPFHT VYLHGLVRDK
DGRKMSKTYG NVVNPLDVIE QHGADALRFM LATSSSPGQD LNLNPERIEA ARNFANKTWN
IARFVLSKLD AHTPPGDPRP ATLADRWILS RYHRLVTDVD RLMRSYNFGE AGRSIQEFLW
SEFADWYVEV AKVQFEQDAL QESTRAVLYT TLEGALRLLH PFMPFVTEET WQYLVRNYRT
DATPASIMIA PYPQPDAAWI DDGIEREWAL VQALITGIRN IRTEYKVEPA RLIAATIVAG
AQTPLIEAQR AVIARLARIA DDQLTIGAAI DQRPANAATL VIGSVEAYLP LAGMIDLEAE
RARLLKDLEA ALAEAARREA RLATPGFVEK APATVVQRER DGLAAVRETI ARLQDRLAQQ
GFHP
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