| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0123 |
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| Symbol | |
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| ID | 5207056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 146111 |
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| End bp | 147445 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640593754 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001274513 |
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| Protein GI | 148654308 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGTACG AGTGGCTGGC TATCGCCATG TTCGTCGGGT TCTTCTTTCT CCTGATTAGC
GGGTACCCGG TGGCTTTCTC ATTTGCGGGA ACGGCGATTG TCTTCGGGTT GATCGGATTG
TCGCTCGATG CGTTCAAACT CGACCTGCTC CGCCTGCTGC CGAACCGCTG GTTTGGGACG
ATGTCCGACT TTACGTTGCT GGCGATCCCT TTTTTCATCT ATCTCGGTTC GGTGCTCGAA
AAATCAGGGC TGGCTGAAGA GCTGCTCGAA ACCGTTGGCA TTCTGCTCGG TCCGCTACGC
GGCGGCATCG CTCTCGCCGT TGTTGCAGTG GGGACGCTCC TGGCAGCCAC CACCGGCGTT
GTTGCTGCGA CGATCATTGC GATGGGGTTG ATCTCGCTAC CGATCATGGT GCGCCTGGGG
TACGACAAAG GCCTGGCGAC CGGCGCGATC ACATCATCGG GAACGCTGGC GCAGATGATT
CCGCCGAGTC TGGTGCTGGT GGTGCTCAGC GATCAGATCG GCGTTTCGGT CGGCGATCTC
TTCGCCGGCG CATTGATTCC GGGGTTGATG CTGGCCGGTT CGTATGCGCT CTACTGTCTG
GTCATCGCCT ATCTCAAACC AGACCTCGCG CCTCCTCTGC CACTGGAAAT GCGCCAGATC
CGTGGATGGG CGCTGTTCGC CAAATCGATG AAGGCGCTGG TACCGCCAAT TGCGTTGATC
TTTGCCGTGC TCGGAAGTAT TTTCTTCGGT CTGGCGACGC CGACTGAAGC TGGATCGGTT
GGCGCGGTCG GTGCGATCCT GCTCGCCTGG GCGAATAAGC GCCTGAGCTG GAAGTTGCTG
GCAGACTCGG CGCTCAGCAC GGCGCGCACC AGTACGCTGG TGATTATGAT CCTGTTCTGC
TCCACGTTCT TCTCCCTGGT GTTCGATGGT CTGGGCGGCA CAAAGTTTGT CACCGAGATT
CTGACCGGTC TTCCGGGCGG GTTGCTGGCG TTCATTATTG TCAGTAACAT CGTTGTCTTC
CTGCTCGGCA TTTTCCTGGA ATTCGTCGAG ATCTGCTTTA TTGTCATGCC GCTCTTTGTT
CCCGCCGCAA GTGCGCTCGG CGTCGATATG GTCTGGTTCG GCATCATGAT GGCGGTCAAT
CTCCAGACCG CGTTCATCTC GCCACCGGTC GGCTTCTCGC TCTTCTACCT TCAGAGTGTG
GCGCCAAAGG AAGTGGAAAC TGCCGATATT CACAAAGGGG CAATACCGTT CATGGTGTTG
CAACTCGTTG TGCTGATCCT GGTCATTCTG TTCCCCGGCA CCGTTACCTG GCTGGTCGAG
CGGGTCGCGG GGTAG
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| Protein sequence | MGYEWLAIAM FVGFFFLLIS GYPVAFSFAG TAIVFGLIGL SLDAFKLDLL RLLPNRWFGT
MSDFTLLAIP FFIYLGSVLE KSGLAEELLE TVGILLGPLR GGIALAVVAV GTLLAATTGV
VAATIIAMGL ISLPIMVRLG YDKGLATGAI TSSGTLAQMI PPSLVLVVLS DQIGVSVGDL
FAGALIPGLM LAGSYALYCL VIAYLKPDLA PPLPLEMRQI RGWALFAKSM KALVPPIALI
FAVLGSIFFG LATPTEAGSV GAVGAILLAW ANKRLSWKLL ADSALSTART STLVIMILFC
STFFSLVFDG LGGTKFVTEI LTGLPGGLLA FIIVSNIVVF LLGIFLEFVE ICFIVMPLFV
PAASALGVDM VWFGIMMAVN LQTAFISPPV GFSLFYLQSV APKEVETADI HKGAIPFMVL
QLVVLILVIL FPGTVTWLVE RVAG
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