| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0122 |
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| Symbol | |
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| ID | 5207055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 145505 |
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| End bp | 146101 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640593753 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001274512 |
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| Protein GI | 148654307 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.591808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTCC TCTTGCGCGT GAGCGATGCT ATCGATGCGC TCAATGAATG GATTGGCAGC
AAGACGGCGT ACATTGTCAT GGCGATGGTG GCGATCGGTT TTGTCAACGT TGTTGCGCGC
TATGTCGGGC GTTTCATCGG CGTCCGTCTC ACCTCGAACG CCATTATCGA GTTGCAGTGG
TATCTCTTCT CGATCATGTT CTTTCTGGGT TTTGCCTATA TTTTGAAGCA CAACCTGAAT
GTACGGGTCG ATTTCTGGTA CGCGAACTGG ACCCCACAGC GCCGCGCCCT GATCGATCTC
GCCGGAACGC TGCTCTTCCT GATCCCCTTC TGTATCATTG CGATTATTGT GACTTTCAAT
CCGGTTATGT TTTCCTGGGG ACGCCTGCCC AACGGCAGGT GGGGACCCTG GGAGATGTCG
CCCGATCCTG ATGGTCTCCC ACGGGCGCCG ATCAAGTCGA TGATTATCGT CGCTTTTGTG
CTACTCCTTT TGCAGGCGAT CTCCCAGGCG ATCAAATACC TTGCGATTGT GACCAATGCT
GTTCGCGCCG AACAGGCGGC GCAGATCGAA GAGTACCATG CACCTGTAGT CGAATAG
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| Protein sequence | MQFLLRVSDA IDALNEWIGS KTAYIVMAMV AIGFVNVVAR YVGRFIGVRL TSNAIIELQW
YLFSIMFFLG FAYILKHNLN VRVDFWYANW TPQRRALIDL AGTLLFLIPF CIIAIIVTFN
PVMFSWGRLP NGRWGPWEMS PDPDGLPRAP IKSMIIVAFV LLLLQAISQA IKYLAIVTNA
VRAEQAAQIE EYHAPVVE
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