| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0120 |
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| Symbol | |
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| ID | 5207053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 140964 |
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| End bp | 144251 |
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| Gene Length | 3288 bp |
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| Protein Length | 1095 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640593751 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001274510 |
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| Protein GI | 148654305 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTACGTC CATCTCCTGT CGCAGTCTGG TGCGAGCGTG TGATCGAGGG TGGATGGTTG
CTCGCGCTGC TCCTGATACC AACATACTTC AATCTGCTGT CAGCCCGTCA CTTCGAGCCG
GATAAAGCCA CGACGCTGCG CTCGATTGTG ATGATCATGC TGGCAGCGGC GCTGATCCAT
GCACTCGAAA AAATCTCTGC CTCACGCCCT CCTGCCGACG GGGACGCAAA CGGCGCCTCC
TGGTGGCGTC GTGTCGCCGC TGTGCCGCTC GCTGTTCCAA CCCTGATCTA TGCTGCGGTC
TTCGTGCTGG CGACAGTGGT GTCGGTCGCG CCAGCGGTCA GTTTCTGGGG GTCCTACCAG
CGCTTGCAAG GCACATTCAC GAACCTCTCC TATATCATGC TCGGCGTCCT GATTGCGCTC
TACCTGCGTC GTCGCGCGCA ACTTGATCGC CTGGTCGTCG TGATGATCCT GTCCAGCCTG
ATCGCCGCTG GCTACGGTCT CGTGCAGCAT CTTCAGCTCG ATCCGCTCCC CTGGCGCGGC
GATGTGGTGT CCCGCGTCGC TTCCACGATG GGAAATTCGA TCTTTGTGGC AGCGTACATG
ATCATGGTGC TGCCCTACGC GCTCTATCGC GGCATTATTG CCGTGCATCA TGCGCGCAGC
AGCCAGGTCT CCCCTTCGCA GCCGTCGGTC GATCTCGGAT GGGGAGCGGC GTATGCGCTC
CTGGCGCTGG CCGCGCTGGC GCTGGTTTTC GCCGCCATGA TGTTCAGCGC AGTGGTGCGC
GCCGCCGATC TGCGCTACTG GTGGGTCTAC CCCGGTGCGC TGGTGGTTGC GGGCGGGTTG
TTTCTGCTGA TCGCACTGGC GCCGCACCGC GCTGAGCGCC TGACATTCGG GACGCTGATA
CCAGGCATCC TGCTGCTCGG ATACGTCATC CTTCTCGGCA TTTCGTATAC GCTGGGGCAG
GGACCGAACC AGCGGGTGGT TCCGCTGGAG GGGCGGCCGG GGGTTGAGTG GCCACTCTGG
TTGGGGATTG CGACCGCGCT CATGACAGCC GGTTATGCGC TGGTGATTCT GCTTCCGCGG
CGCCCCGACA CTCCATCGCG CCTCAGTTAC GCACTCGAAG CGGTCGGTGC ATTCGTGATC
ACAGCCCTGC TGCTGATCGC CACCTTTTTT ACCCAGAGTC GCGGACCCTG GATCGGCGGC
TTTGCAGCCC TGTTTGTGTT CTTTACCCTG CTGATTGTGC TCGCGTTGCA CCGGGCGCGT
CGGGATAACC CGGCGCGTGT GCGACTCTGG CGCGGGTTGC TGATCGGTGA AGTGACGCTG
GCGATTGCGC TGGGCGGCTT CCTGGCAGCC TTCAACCTTT CTGATGCGCC GGTCTTTCAG
CAGTTGCGCG ATGTTCCGTA CATCGGTCGC ATGGGGCGTC TGCTCGAAGT GGAGAGCGGC
ACAGGACGGG TGCGCTGGTT GATCTGGTTC GGCGATGATA AAGCCGGCGG CGCCGCCGGT
CTCATCCGCT CCGACCCATT GCGCATGATC GTCGGATGGG GTCCCGAAAC CATGTTTGTG
GCGTACAACC CGTTCTACCC CCCATCGCTC ACCAGCCTCG AAGCACGATC AGCATCGCCG
GATCGATCCC ACCAGGCGTA TCTCGATGAG ATCATCAACA AAGGGTTGCT CGGGCTGATC
AGTTACCTCT TTCTCCTGTT CAGTTTCTTC GCGCTGGCGT GGCGTCTGAT GACGCACCTG
GACGATTGGG GGTTGCAGGT GCTGATCATC GCTGCGGTTG CCGCCGTGAC GGCGCACGCG
GTTGAGGGAT TGACCGGCAT CCCGATTGTA TCGACGTTGA TGCTCCAATG GGTGTCTTTT
GCGGTTGTCG TGTCTGCTGG CGGAATCGCC GGCATGTACC GCCTGCCCGG TATGCCGCCT
GTACAGACCA TGCCGGAGAA GGCATCAGCT TTGCCTGGAG CGCCAACTCC CGATAACGCG
ACCCGTTCAA GCAGAACGCC GAAAGACAGA GCGCCGGAGA AAGCGACAAC ATCTGCCCGT
CAGCGCAGCG GGCGACGCGC CGAGGCGGTC AGGCGCGGAT CGTCGCCTGC TCGACCGGCT
GCGTCACGCA CCCGCCAGGA AGGGCGTGCA GCGGCGATGG CCGTGTACGC CGTGATTCTC
ATCATCGCCC TGCTGGGCGT CTGGGCGTTC AATGTGGACA GCGTGCTCGC GGATATGCGG
CTGCAACAGG CGCAGGGGTA TATCGACAAT CCGGGCGGCA GGCTGGAACA ACAGATCATC
GGCGCCAGTT ATCTGCTCGA CGCGATCCGC ATGGAGCCGG ATCAGGACTT CTACTACCTG
ACCCTTGGTC GGTCGCTGAT GACCATGGTC ACGCTGCGCG TCAATGAGGC GCGCCAGAAC
GGTGCATCGC TCGGTCAGAT CGACCCGAAT GCCAGCGTTG CAACGCTGCT GCAACTCGAT
GACACGGCGG CGCTGCAGTC GTTTGTGCTG CAACGCACGC CGATGGAACT GCTGAGTTAT
GCCCGCGCCG TTCTGCTGCG CGCGCAGCAA CTGGCGCCGC TCAACAAGGA TCACGCTGCC
AACCTGGCGC GCATGTACAA TTTCTGGTAC CAGAACCTGA GCGGTGGTCA GGATCGCGAA
GCGCTGACGC AGGCGATAGA ATGGTATCAA CGAGCGCACG CAATTGCGCC ACAGGATGTC
GCCATTCTGA ACGAGTACGC TGCCGCCGTC GCCCGATCCG GCGACTACGA TCAGGCGCTG
GCGTTGCTCG AAAAGTCGCG CTGGCTCGAC CCGCTCTACA ACGATACGCC TCTGCGGATG
GGCGACATCC TGCGCACGCA GGGGAAATTC GCCGACGCTG TCGATCACTA CCTGATGGTG
CTGGAGCGTG ACCCGCGCGC GCTCGATGGG CAGATCACCG CCATCGCCGC AGCGCTCTCC
TCTGATCCTG ATCAGATGAA ACGCCTGCGC GACGGCTACC TGGCGGCGCG ATCTTCCCGC
CCCGATGACC CGCAACTGTC GTCGATCATC GGATTGCTGT CGGTGCGCGC TGGCGACCTC
GAAACCGCTG CAACCGCGTT TGCCGAAGCG GTACGCTTGC AACCGGACAA CCTGGAAGCG
CGCCAGAACT ACACGATCGT GCTCAGTGAT CTGCTGCGCT ACGATCAGGC GGCGCAACAG
GCGCAGGAAC TGTTGACGCG TGCGGCGCAA CGCCAGGAGA CGACCGACCA GCAGCGCGCT
GCGATCGAAG CCTTGCTCGG TTATCTCCGA CAACGCGCGG GCGGTTGA
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| Protein sequence | MLRPSPVAVW CERVIEGGWL LALLLIPTYF NLLSARHFEP DKATTLRSIV MIMLAAALIH
ALEKISASRP PADGDANGAS WWRRVAAVPL AVPTLIYAAV FVLATVVSVA PAVSFWGSYQ
RLQGTFTNLS YIMLGVLIAL YLRRRAQLDR LVVVMILSSL IAAGYGLVQH LQLDPLPWRG
DVVSRVASTM GNSIFVAAYM IMVLPYALYR GIIAVHHARS SQVSPSQPSV DLGWGAAYAL
LALAALALVF AAMMFSAVVR AADLRYWWVY PGALVVAGGL FLLIALAPHR AERLTFGTLI
PGILLLGYVI LLGISYTLGQ GPNQRVVPLE GRPGVEWPLW LGIATALMTA GYALVILLPR
RPDTPSRLSY ALEAVGAFVI TALLLIATFF TQSRGPWIGG FAALFVFFTL LIVLALHRAR
RDNPARVRLW RGLLIGEVTL AIALGGFLAA FNLSDAPVFQ QLRDVPYIGR MGRLLEVESG
TGRVRWLIWF GDDKAGGAAG LIRSDPLRMI VGWGPETMFV AYNPFYPPSL TSLEARSASP
DRSHQAYLDE IINKGLLGLI SYLFLLFSFF ALAWRLMTHL DDWGLQVLII AAVAAVTAHA
VEGLTGIPIV STLMLQWVSF AVVVSAGGIA GMYRLPGMPP VQTMPEKASA LPGAPTPDNA
TRSSRTPKDR APEKATTSAR QRSGRRAEAV RRGSSPARPA ASRTRQEGRA AAMAVYAVIL
IIALLGVWAF NVDSVLADMR LQQAQGYIDN PGGRLEQQII GASYLLDAIR MEPDQDFYYL
TLGRSLMTMV TLRVNEARQN GASLGQIDPN ASVATLLQLD DTAALQSFVL QRTPMELLSY
ARAVLLRAQQ LAPLNKDHAA NLARMYNFWY QNLSGGQDRE ALTQAIEWYQ RAHAIAPQDV
AILNEYAAAV ARSGDYDQAL ALLEKSRWLD PLYNDTPLRM GDILRTQGKF ADAVDHYLMV
LERDPRALDG QITAIAAALS SDPDQMKRLR DGYLAARSSR PDDPQLSSII GLLSVRAGDL
ETAATAFAEA VRLQPDNLEA RQNYTIVLSD LLRYDQAAQQ AQELLTRAAQ RQETTDQQRA
AIEALLGYLR QRAGG
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