| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0119 |
|---|
| Symbol | |
|---|
| ID | 5207052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 139126 |
|---|
| End bp | 140925 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640593750 |
|---|
| Product | DNA repair protein RecN |
|---|
| Protein accession | YP_001274509 |
|---|
| Protein GI | 148654304 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0497] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCTTG AACTCAACAT CAGCGATTTT GCGATTATCG AACGCCTCAA TCTGCGCTTC
TGCGACGGGT TCAATGTCCT GACCGGCGAA ACCGGCGCTG GCAAGTCGAT CATTATCGAT
GCGCTAGGCA CGCTGCGCGG CGAGCGGACT GACCCCTCGT TTGTGCGCGC CGGAAGTGAG
CGCGCGCGGG TTGAGGGGAT TTTCAGCATC GCCGATCGCC CCGATCTCCT CGCGCTCCTC
GATGAGTATG GCTTGCGCGA CGACGACGAT CAGGTGATCC TGTCACGCGA GATCATCCGT
GAGAGCGGGC GCAGTGTTGC GCGCGTGAAC GGTCGTGCGG TAAGCAGCGC CGTGTTGCGC
GATATTGGCA GCCGCCTGGT TGATATTCAC GGTCAACACG AAGGTCTTTC GCTCTTCAAC
AGTCGCACCC ACGGCGAGAT GCTCGATCGG TTCGGCGGTC TGATACCGTT GCGTGAACGG
GTTGCGGCGC AGGTTGCGGC GCTGCGCCAG GTGCGCGACG AACTCGATGC GTTGCGGCGC
GCAGCGCAGC GTCGGACTGA GCGCATCCAG GAGTTGACGT TCCTGCTCGA GGACGTTCGA
GCAGCGCGTC TGCGTCCGGG TGAAGAGGAG GAGTTGCTGC GCGAGCGTGC GCTGCTTCAG
AATGGTGCGC GCATTACAGA ACTGGTGACA ACGACATATG CGCTCCTGTA TACCGGCGAT
GAGACAGGGC GACGCGCCGC TCGACCCGCC GTCGAACTCC TGGGCGCTAT CAACGATGCG
CTGACCGAAC TCGCCCGCCT TGACCCGACG CTGAGCCAGG CAGCCGAACA GGCGGCTGAA
CTGCTCTACA GTGTTGAGGA TCTGGCAACG CGCATCCGCG CCTATCGCGA TTCCATGGAG
TTTGATCCGG CTCGTCTCGA TGCTATCGAG GATCGTTTGA CGCTGATCCG CGATATGCAG
CGAAAGTATC GCGGCAGTAT CGAGCATATC CTGGAGCGCG CAGCATCCGC TGAGGCGGAG
ATTGAACGCC TGACCCGCAG CGCGGAGCAT CTGGCTGACC TGGAAGCGAA AGAACAACGC
CTGCTCGATG AGATCGGTCG TCTCGCTGGC GAGTTGTCGC AACGGCGGCG TGAAGCAGGT
GATCGCCTGG CAGCGGCGGT CGAACAGGCA GCGCGCGATC TCGCTCTCCC ACATGTGCGC
TTCGCAGTCA ATCTGGAACG CACTGAAGAT CCGGAAGGGG TTCCAATCAT CGAGAACGGC
GTTGAGCGCC GCTGGTCGTT TGATCGCTCC GGTGTCGATA CGGTTGAATT CCTGCTCTCG
CCCAACCCCG GCGAACCGCT CAAGCCACTG GCGCGGATTG CGTCGGGCGG CGAAAGCGCC
CGTCTGCTGC TGGCGTTGAA ATCGATCCTT TCGCGCGTTG ATGACATTCC GACCCTGGTG
TTCGATGAGA TCGACGTCGG CGTTGGCGGT CGCGCCGGTC AGGTGGTGGG CGAGAAACTC
TGGAGCATCA GCGACCGGCA TCAGGTCATC TGCATCACGC ACCTGCCGCA GGTCGCCGCA
TTCGCCGATG CGCACTACGC AATTGCCAAA CTCTTCAGTG ACGGCCGAAC GCGCACGGTG
GTGGCGCAAC TCGACGATGC CCAGCGAGCG CATGAGATTG CTGCCATGCT CGATGGTACG
CCGGTGAGCG AACACAGTCT TCGGAGCGCT CTGGATATGC TCGAACGGGC GCGGGCGTAC
AAACAGCGGA CTGATCGCAA TCTGTCACCT GACGCACTTC ACGTTGAGGT CAAGCAATGA
|
|---|
| Protein sequence | MLLELNISDF AIIERLNLRF CDGFNVLTGE TGAGKSIIID ALGTLRGERT DPSFVRAGSE
RARVEGIFSI ADRPDLLALL DEYGLRDDDD QVILSREIIR ESGRSVARVN GRAVSSAVLR
DIGSRLVDIH GQHEGLSLFN SRTHGEMLDR FGGLIPLRER VAAQVAALRQ VRDELDALRR
AAQRRTERIQ ELTFLLEDVR AARLRPGEEE ELLRERALLQ NGARITELVT TTYALLYTGD
ETGRRAARPA VELLGAINDA LTELARLDPT LSQAAEQAAE LLYSVEDLAT RIRAYRDSME
FDPARLDAIE DRLTLIRDMQ RKYRGSIEHI LERAASAEAE IERLTRSAEH LADLEAKEQR
LLDEIGRLAG ELSQRRREAG DRLAAAVEQA ARDLALPHVR FAVNLERTED PEGVPIIENG
VERRWSFDRS GVDTVEFLLS PNPGEPLKPL ARIASGGESA RLLLALKSIL SRVDDIPTLV
FDEIDVGVGG RAGQVVGEKL WSISDRHQVI CITHLPQVAA FADAHYAIAK LFSDGRTRTV
VAQLDDAQRA HEIAAMLDGT PVSEHSLRSA LDMLERARAY KQRTDRNLSP DALHVEVKQ
|
|---|
| |