Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0115 |
Symbol | |
ID | 5207048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 135782 |
End bp | 136363 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640593746 |
Product | hypothetical protein |
Protein accession | YP_001274505 |
Protein GI | 148654300 |
COG category | [S] Function unknown |
COG ID | [COG1259] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTG TAACTGTTGA CAGCATCCGC GTGAGTCTGC TGACACAGCA CCGTGTCGTC GTCCTGCGCG AAGCCGAGAG TCGGCGCTAT CTGCCGATCT GGATCGGCGC CTTCGAGGCG GATGCGATTG CGCTCGCTAT GCAGGGGCAC GAACCACAGC GCCCGATGAC GCACGATCTG CTCAAATCGG TCTTCGGTGA ACTGGGCGCG ACGATCAGCC ACATCGTCAT CAATGACATC CAGGATAGCA CCTTCTTTGC GCGGATCGTC GTCGAGCAGG GCAGCCACAC CATTGAGATC GACTCCCGTC CCAGCGATGC GATCGCGCTC GCGGTTCGCG CCGATGCGCC GATCTATGTC GAAACGCATG TCTTTGAGGC TGCCGGTGTG CTCTTCGACG AGGAGGAAAC CACCGCAGCC GATGAGCAAC CGATGAGTGC AGCGCGACCT TCCGCAAGCA TGGCTGAGAC TGATGAACCA GATGCCGACA CATCCGCCGA TGAGGGCCTG TCGCTTTTCC GCGATTTTAT CAACACCCTG GACATTGATG ACGATGAAAA GAATAAGGGG AAGAACCAGT AG
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Protein sequence | MIRVTVDSIR VSLLTQHRVV VLREAESRRY LPIWIGAFEA DAIALAMQGH EPQRPMTHDL LKSVFGELGA TISHIVINDI QDSTFFARIV VEQGSHTIEI DSRPSDAIAL AVRADAPIYV ETHVFEAAGV LFDEEETTAA DEQPMSAARP SASMAETDEP DADTSADEGL SLFRDFINTL DIDDDEKNKG KNQ
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