Gene RoseRS_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0115 
Symbol 
ID5207048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp135782 
End bp136363 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content59% 
IMG OID640593746 
Producthypothetical protein 
Protein accessionYP_001274505 
Protein GI148654300 
COG category[S] Function unknown 
COG ID[COG1259] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTG TAACTGTTGA CAGCATCCGC GTGAGTCTGC TGACACAGCA CCGTGTCGTC 
GTCCTGCGCG AAGCCGAGAG TCGGCGCTAT CTGCCGATCT GGATCGGCGC CTTCGAGGCG
GATGCGATTG CGCTCGCTAT GCAGGGGCAC GAACCACAGC GCCCGATGAC GCACGATCTG
CTCAAATCGG TCTTCGGTGA ACTGGGCGCG ACGATCAGCC ACATCGTCAT CAATGACATC
CAGGATAGCA CCTTCTTTGC GCGGATCGTC GTCGAGCAGG GCAGCCACAC CATTGAGATC
GACTCCCGTC CCAGCGATGC GATCGCGCTC GCGGTTCGCG CCGATGCGCC GATCTATGTC
GAAACGCATG TCTTTGAGGC TGCCGGTGTG CTCTTCGACG AGGAGGAAAC CACCGCAGCC
GATGAGCAAC CGATGAGTGC AGCGCGACCT TCCGCAAGCA TGGCTGAGAC TGATGAACCA
GATGCCGACA CATCCGCCGA TGAGGGCCTG TCGCTTTTCC GCGATTTTAT CAACACCCTG
GACATTGATG ACGATGAAAA GAATAAGGGG AAGAACCAGT AG
 
Protein sequence
MIRVTVDSIR VSLLTQHRVV VLREAESRRY LPIWIGAFEA DAIALAMQGH EPQRPMTHDL 
LKSVFGELGA TISHIVINDI QDSTFFARIV VEQGSHTIEI DSRPSDAIAL AVRADAPIYV
ETHVFEAAGV LFDEEETTAA DEQPMSAARP SASMAETDEP DADTSADEGL SLFRDFINTL
DIDDDEKNKG KNQ