Gene RoseRS_0113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0113 
Symbol 
ID5207046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp133367 
End bp134515 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content60% 
IMG OID640593744 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001274503 
Protein GI148654298 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.741915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTGGT TTCATCGACT CCGCTGGAAA TTGTTTGTTT CCCACGCGAT CATTATTGTG 
ATCGCGGTGG TCGTGCTGCT TGGCGCCGCG CAGATTCTGG TGCGCAGCAG CATGATGGAA
AGCGCGACCC TGGCGTCATT GTCCGCAGGG GATGATCTGC TGATTGCGTC AGGTGAAGTC
GCCGTGCAAC GCCGGTTTCA GTCTATTCTT GAACAGGCGC TGTTACTCGC AAGTTTTGGT
GCGCTCGCCG CAGCAGTCGT CGTCAGTCTG TTCGTCTCCC GGCGCATCGT TGAGCCGTTG
CAGGATCTGA CCGCCGTGAG TCGTCGGTTG GCGCAGGGGT ACTACCGTGA GCGGACGTTC
ATTCATTCCG ATGATGAACT GGCTGAGTTG AGCCAGAGTA TTAATCATCT GGCGGAGGCG
CTCGATCGCA CCGAACAGCG TCGCCTGGCA CTGATCGCAG ATGTGGCGCA CGAGTTGCGC
ACGCCGCTGA CCACGATTGA GGGGTACATG GAAGGCTTGC TGGACGGCGT TATTGCACCG
GACGAGCAAA CATTCACGCT GATCCGCCAT GAAGCGGCGC GGTTGCGTCG TCTGACCGAG
GAACTTGGTC TGTTGTCACG CGCCGAAGCT GGCGAACTGC GCGTCCAGCC GCGCCTGTTC
GATCTCTGTA CCATGTTGCA GGAGTTGATC GCTCGCTTTC AGCCGCAGTT CGCCGCCTGC
GAGGTCGAGT TGCGTCTGTA CCTGTCGGTT CAGTCCCTCA CCGTCTATGC CGATCCTGAT
CGCCTTATGC AGGTCATGGT GAACCTGCTA TCGAATGCGC TGCGCTACAC CCCCGCCGGC
GGTCTGGTGG AGGTGTCGTT GACGCCGCTC GGCGAGTATG TGCGCATTTC GGTGCGCGAC
ACCGGCATCG GCATTGAAGC CGAACATCTG CCGCTCATTT TTGAGCGCTT CTATCGCGTG
GACAAGTCGC GCACGCGCAA TAGCGGCGGA ACTGGTATTG GATTGACCAT TGCCCGGCAC
CTGGTGTATG CCAGCGGCGG TGAGATCTGG GCGGAAAGCG ATGGCGCCGG CAAGGGATCG
ACGTTTCATG TCACCCTGCC GACCGCCGTC GTCTACCAGC CGGTTCAGAT CGCTGTTGCG
GATGGCTGA
 
Protein sequence
MSWFHRLRWK LFVSHAIIIV IAVVVLLGAA QILVRSSMME SATLASLSAG DDLLIASGEV 
AVQRRFQSIL EQALLLASFG ALAAAVVVSL FVSRRIVEPL QDLTAVSRRL AQGYYRERTF
IHSDDELAEL SQSINHLAEA LDRTEQRRLA LIADVAHELR TPLTTIEGYM EGLLDGVIAP
DEQTFTLIRH EAARLRRLTE ELGLLSRAEA GELRVQPRLF DLCTMLQELI ARFQPQFAAC
EVELRLYLSV QSLTVYADPD RLMQVMVNLL SNALRYTPAG GLVEVSLTPL GEYVRISVRD
TGIGIEAEHL PLIFERFYRV DKSRTRNSGG TGIGLTIARH LVYASGGEIW AESDGAGKGS
TFHVTLPTAV VYQPVQIAVA DG