| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0112 |
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| Symbol | |
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| ID | 5207045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 130968 |
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| End bp | 133250 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640593743 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_001274502 |
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| Protein GI | 148654297 |
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| COG category | [R] General function prediction only
[S] Function unknown |
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| COG ID | [COG4147] Predicted symporter
[COG4327] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03647] probable solute:sodium symporter small subunit
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTGGC TCGCGATGGT CTCCATCGCG CTGCTGCTCC TGACATTGCT GTTTCCGCAA
CTTGAACGCC GCGACGAAGA GCGTCCCCGC ACACTGACGC CGCCGTATGT GCCCCGTCGT
CAATCTGAGC AGCCCTCTAT GCCGGCGGTG ACGATCGTTG AAACCCCGAA AACTGCGAGT
CTCTCCCGTT CAGTGCAAAC TGCCTACTGG TCGGCAAATA CGCGGCTGAT TCGCATCTTG
CTGCTGGTAT GGGGCGGGAG TGTGTTCTTA CCAGCCATGT TCGCGGCTGA ATTGAACCGG
ATACGGGTGT TGACCGGCTT TCCGTTGTCC TACTTTCTCG CTGCACAGGG CGCTCCAATC
CTTTTCCTTG TCCTGGCTGC ACTCTATACC GCGATCATGA CACGCCGCGA TCGTCAGTTG
GGAGGGCGCC AGGTCGATCC ATCCCTGCCG GTTGCCGACG CAATGTTGCC GGTGGCGCTG
GTGATCGGCG GCGGTGCGCT GATTGTCGTT GTCGATGTGG TGTTTCGACT GCCGGTGACC
ATCATTGGCT GGGGCTTGAT CATCCTGACG ATCGTGGTCT ATGCTTCAAT TGGCATCCGC
GGCCGCGCCC AAGACCTGGA AGCGTACTAT GTGGCGGGGC GACGCATCCC GGCGTTGTTC
AATGGGCTGG CGATCAGTGC GGACTGGATG AGCGCGGCGA CCTTTATCTC GCTTGCCGGT
ACGCTCTGGA TGTTGGGCTA TGAAGGGCTG GCGTACATCA TCGGCTGGAC CGGCGGATAT
GTGTTGCTGG CGCTGCTGCT GGCGCCCTAT CTGCGCAAGT TCGGACAGTA CACCATTCCT
GAGTTTATCG GCGCGCGCTA TGCCTCGACT GTCGCACGCC TGGTCGCCGC GATTGTGACG
GTTATCGTTT CGTTCACCTA TTTGACGGCG CAGGTGTCCG GGATTGGTCT GATTATGGGG
CGCTTTCTTG GCGTCAATTA CCTGTTTGGC GTTGCGATCG GTCTTGGCGC GGTGCTGTTC
TGCTCCTACC TGGGAGGAAT GAAGGCGGTC ACATGGACGC AGGTTATCCA GGCGATCGTG
ATCGTGGCGA CCTATCTGAT CCCTGCCGCA CTGCTGTCGC TCAGAGATAC AGGGGTCGCT
CTGCCGCAGA TCATGTATGG CGCTGCCTTC GATGTCATTG CCGATCTTGA ATCCACCCAG
AATATCCCAA AATCATATGC CGAACCATTC AATGACTGGT CGGTCTGGCA ATTTCTGGCG
CTGGCGTTCT GTCTGATGTG CGGCACTGCC GGTCTGCCTC ATATCCTGGT GCGGTTTTAT
ACGACGCCGT CGGTGATCCA TGCCCGGCGC AGCGTAAGCT GGGCGCTTTT GTTCATTGCG
CTGGTCTATC TGACCATCCC GGCGTATGCC GCCTTCTCGC GCTGGGAAAT CCTTGCGCAC
GTCGTTGGTC AGTCGGTGCG TTCGCTGCCA CAGTGGGCAG TGAACTGGGG GAATGCCGGA
CTGTTGAGCA TTACCGACCT GACGACGCTT GAAGGAGAGA CGGTGGCGAC CGTGCCGGGA
TGGGCGAAGA GTCTGCTGGA AAGCGGGGGG CTGCAATTTG TCGATGCGAA CGGTGATGGG
CGCATCCAGA TCGAAGAGTT GAGCGGGCGC GCGGTTACTC CCACGTCGAT TGACGGCATC
TTACAGTACA ACGAGTTGAA AATCAGCCCC GATCTGGTCG TGGTCTCGAC GCCTGAAATC
GTTGGTCTTC CTGGCGCCGT CGCTGCACTG GTGATCGCCG GCGGGCTGGC GGCGGCGTTG
AGTACTGCCG ATGGATTGTT GATCGTCATT ACGTCGTCGG TGGCGCTCGA TGTCTATCAA
TCGTTGAACC GGCACGCACC GGCGCGTACC TTGCTTGCGA TCGGGCGTAT CGCCCTGTTC
CTGGCAGCGG TGCTGGCTGC GCTCACCGCA CTGCGCCAGC TGGGTATTAT TGTCGAACTG
GTTGCATGGG CGTTCTCCAT CGCGGCGGCA ACCCTGTTCC CGGTGCTGAC GCTCGGCATC
TTCTGGCGAC GCGCCAATCG TCAGGGGGCG ATTGCCGGCA TGATCACCGG TCTGCTCGCC
GTTGCCGGCG CCATCGTCAT CAACCTGTTG AGTCCATCCA CGAATTTCCT TGGTATTTCC
GGTCCCGCAA CCGGTATCTT CGGCATCGTC GCCGCACTGG TCATGACCAT CGTTGTCAGC
CTCCTGACCC CCCCGCCTCC GCCAGCGACC CAGACGTTGA TCGATGCCGT TCGACGTCCG
TAG
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| Protein sequence | MFWLAMVSIA LLLLTLLFPQ LERRDEERPR TLTPPYVPRR QSEQPSMPAV TIVETPKTAS
LSRSVQTAYW SANTRLIRIL LLVWGGSVFL PAMFAAELNR IRVLTGFPLS YFLAAQGAPI
LFLVLAALYT AIMTRRDRQL GGRQVDPSLP VADAMLPVAL VIGGGALIVV VDVVFRLPVT
IIGWGLIILT IVVYASIGIR GRAQDLEAYY VAGRRIPALF NGLAISADWM SAATFISLAG
TLWMLGYEGL AYIIGWTGGY VLLALLLAPY LRKFGQYTIP EFIGARYAST VARLVAAIVT
VIVSFTYLTA QVSGIGLIMG RFLGVNYLFG VAIGLGAVLF CSYLGGMKAV TWTQVIQAIV
IVATYLIPAA LLSLRDTGVA LPQIMYGAAF DVIADLESTQ NIPKSYAEPF NDWSVWQFLA
LAFCLMCGTA GLPHILVRFY TTPSVIHARR SVSWALLFIA LVYLTIPAYA AFSRWEILAH
VVGQSVRSLP QWAVNWGNAG LLSITDLTTL EGETVATVPG WAKSLLESGG LQFVDANGDG
RIQIEELSGR AVTPTSIDGI LQYNELKISP DLVVVSTPEI VGLPGAVAAL VIAGGLAAAL
STADGLLIVI TSSVALDVYQ SLNRHAPART LLAIGRIALF LAAVLAALTA LRQLGIIVEL
VAWAFSIAAA TLFPVLTLGI FWRRANRQGA IAGMITGLLA VAGAIVINLL SPSTNFLGIS
GPATGIFGIV AALVMTIVVS LLTPPPPPAT QTLIDAVRRP
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