Gene RoseRS_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0108 
Symbol 
ID5207041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp126770 
End bp127945 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content62% 
IMG OID640593739 
Productcompetence/damage-inducible protein CinA 
Protein accessionYP_001274498 
Protein GI148654293 
COG category[R] General function prediction only 
COG ID[COG1058] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA 
TIGRFAM ID[TIGR00177] molybdenum cofactor synthesis domain
[TIGR00200] competence/damage-inducible protein CinA N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTG AAATCCTGGC GGTCGGTTCG GAGTTGCTGC TCGGTGAGAC GGTCGATACC 
AACAGCGCCT ATCTGGCGCG GCAACTGGCG TCGATAGGCA TCGACCTGTT TCGCAAGTCG
GTCGTCGGCG ACAACGAAAT GCGTATCGCC GCAGCCATTG ACGAAGCGCT CAATCGCGCC
GATCTTGTCA TCTGCACCGG CGGGCTTGGT CCAACGGTCG ATGATGTTAC CCGTGAGGCA
GTGGCGCGCG CCCTGCAACG ACCGCTGGTG TTCCACCAGC ACCTGCTCGA TCAGATCGAG
GCGCGTTTCC GCGCTTTCGG TCGGTCTATG CCGGAGAGCA ATCGTCGGCA GGCGTATGTT
CCTGAGGGGG CGCGCATTGT CGAAAATCCG CGCGGCACCG CCCCCGCCTT CATTGTTGAG
GATGCTCGCG GGACTGTGGT GGTTCTGCCT GGCGTTCCTT CCGAAATGCG CTACCTGTGG
GAGAACGCCA TTCTGCCGTA CCTGCGCGAC GAACGTGGTG AAACCGGGAT CATCCTGGTG
CGCACACTCC ACGCCGTCGG TCTCGGCGAG AGCGTGATCG GCGAAAGGCT TGCCGACCTG
ATGGCGCAGA CGAATCCGAC TCTCGGCATT TCCGCCAAGC ACGCCCGGTA TGAATTGCGC
ATCGGCGCCA AAGCCAGCAG TCGCGCAGCC GCCGAAACGA TGATCGCGCA GGTCGAGGCG
GTCATCCGTG AGCGCCTCGG TTCGCATCTG CTTGGTGATG AACGGCTTGA TCAGACTGTC
GCCCGAATGC TCCGCGAGCG CGGGAAGACG CTTGCACTGT ATGAGGGCGC GGTGACGGCG
CCGCTCTACC GTGCATTGAG CAAAGAAGCG CTCGAAAGCG TGCGCGGGGT TATCATGCAT
CCCACCGACA TCCCGGCTGA TGATGATGCG GCGCAGAGTC TTGCGCGCAC CGGCGCCATT
GACGTGCGTC ATCGCTGGCG CACCGACATC GGACTGGCGT TGCAACCGTC CGGTTTGATC
GCCTCTGATG GCTTCGCAAC GGTATGCGTG GCAATTGCGC ATACCGGCGG GGTCGATGAA
TGGCAACGCC GCTTCGATAT GCGAAGTGAC GATGTCTGGG ACTTTGCCGG AACGATGGCG
CTCGATGCGC TGCGCCAGCA CCTTGCGTCA GCATAG
 
Protein sequence
MNAEILAVGS ELLLGETVDT NSAYLARQLA SIGIDLFRKS VVGDNEMRIA AAIDEALNRA 
DLVICTGGLG PTVDDVTREA VARALQRPLV FHQHLLDQIE ARFRAFGRSM PESNRRQAYV
PEGARIVENP RGTAPAFIVE DARGTVVVLP GVPSEMRYLW ENAILPYLRD ERGETGIILV
RTLHAVGLGE SVIGERLADL MAQTNPTLGI SAKHARYELR IGAKASSRAA AETMIAQVEA
VIRERLGSHL LGDERLDQTV ARMLRERGKT LALYEGAVTA PLYRALSKEA LESVRGVIMH
PTDIPADDDA AQSLARTGAI DVRHRWRTDI GLALQPSGLI ASDGFATVCV AIAHTGGVDE
WQRRFDMRSD DVWDFAGTMA LDALRQHLAS A