Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0107 |
Symbol | |
ID | 5207040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 126007 |
End bp | 126735 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640593738 |
Product | hypothetical protein |
Protein accession | YP_001274497 |
Protein GI | 148654292 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.538941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCTTC GCACTGCTAT CCGAACCGTC CACAGCGACC CGCTCTGGTG GCGCAAAATC CTGATCGGTG GCGCGTTATT CATGTCGATC ATTGGTGCGC CGTTTGCTGG CGGGTGGATT ATCGAGTATA TCGATAATTC ACGGAAAGGG TATGCCACGC CGCTGCCTCC CTGGTTCGAC TGGTCGACGC GCTGGATTAT GGGCATGTTC GCCTGGATCA TCGATTTTCT GTTCTATGTG ATGCCGCTCA TGATCGCAGG CGTTCTCTTC TTCTGCGTTG CATTTTCAGC AGTGTTGAGC AACTCGCCCG GGCTTGCCGG GCAATTGTTC GCAGTGCTGG GCGCCATTCT CGCTCTTTAC CTGACATTCG TCTTTCTGAG CAGCGTTTCG ATGGTGGGGC GTCTGATCTA TGTGCAGGAC GCTTCGCCGG AGCACGCCAT GAGCATGCGC GCCATGCGCG AGGCGTTGCG CCCCGGAGCG CGCGCTGTGT ATTTTCGCGC CCGCCTGGCG TCGCTGCCCG CATACCTGCC GGCAGTCGCG CTCGGTGCGC TGACGTTCCT GGCTGCCAGT CGTTTGACCA TTCCCGGTAC GTTGCTGATT GTGGCGCTGC TGATCTGGTT GACGTTGAGC GCGTTGCTGT ATGCGCATCT CATCGTCGTC CAGATCTATG TCGCTGCGGA ACGCGAACTC GAACGGCGGG GACTGGCTCG TGTCCGTGAG TTGGTGTAG
|
Protein sequence | MNLRTAIRTV HSDPLWWRKI LIGGALFMSI IGAPFAGGWI IEYIDNSRKG YATPLPPWFD WSTRWIMGMF AWIIDFLFYV MPLMIAGVLF FCVAFSAVLS NSPGLAGQLF AVLGAILALY LTFVFLSSVS MVGRLIYVQD ASPEHAMSMR AMREALRPGA RAVYFRARLA SLPAYLPAVA LGALTFLAAS RLTIPGTLLI VALLIWLTLS ALLYAHLIVV QIYVAAEREL ERRGLARVRE LV
|
| |