Gene RoseRS_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0107 
Symbol 
ID5207040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp126007 
End bp126735 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content59% 
IMG OID640593738 
Producthypothetical protein 
Protein accessionYP_001274497 
Protein GI148654292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.538941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTTC GCACTGCTAT CCGAACCGTC CACAGCGACC CGCTCTGGTG GCGCAAAATC 
CTGATCGGTG GCGCGTTATT CATGTCGATC ATTGGTGCGC CGTTTGCTGG CGGGTGGATT
ATCGAGTATA TCGATAATTC ACGGAAAGGG TATGCCACGC CGCTGCCTCC CTGGTTCGAC
TGGTCGACGC GCTGGATTAT GGGCATGTTC GCCTGGATCA TCGATTTTCT GTTCTATGTG
ATGCCGCTCA TGATCGCAGG CGTTCTCTTC TTCTGCGTTG CATTTTCAGC AGTGTTGAGC
AACTCGCCCG GGCTTGCCGG GCAATTGTTC GCAGTGCTGG GCGCCATTCT CGCTCTTTAC
CTGACATTCG TCTTTCTGAG CAGCGTTTCG ATGGTGGGGC GTCTGATCTA TGTGCAGGAC
GCTTCGCCGG AGCACGCCAT GAGCATGCGC GCCATGCGCG AGGCGTTGCG CCCCGGAGCG
CGCGCTGTGT ATTTTCGCGC CCGCCTGGCG TCGCTGCCCG CATACCTGCC GGCAGTCGCG
CTCGGTGCGC TGACGTTCCT GGCTGCCAGT CGTTTGACCA TTCCCGGTAC GTTGCTGATT
GTGGCGCTGC TGATCTGGTT GACGTTGAGC GCGTTGCTGT ATGCGCATCT CATCGTCGTC
CAGATCTATG TCGCTGCGGA ACGCGAACTC GAACGGCGGG GACTGGCTCG TGTCCGTGAG
TTGGTGTAG
 
Protein sequence
MNLRTAIRTV HSDPLWWRKI LIGGALFMSI IGAPFAGGWI IEYIDNSRKG YATPLPPWFD 
WSTRWIMGMF AWIIDFLFYV MPLMIAGVLF FCVAFSAVLS NSPGLAGQLF AVLGAILALY
LTFVFLSSVS MVGRLIYVQD ASPEHAMSMR AMREALRPGA RAVYFRARLA SLPAYLPAVA
LGALTFLAAS RLTIPGTLLI VALLIWLTLS ALLYAHLIVV QIYVAAEREL ERRGLARVRE
LV