| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0090 |
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| Symbol | |
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| ID | 5207023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 103222 |
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| End bp | 103860 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640593722 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001274481 |
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| Protein GI | 148654276 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000230493 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0688251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAACC AATCCTCTGA TGAGTACATT CGCACAACAG CCGCCATCCC CCGCACCGAC
ACTCCAGACG ACCATGTTCT GATCGCGGCA ATCGCACAGG GAGACAGCAG CGCGCTCGAG
ACGCTTTACG ACCGCTATTC GTCTGTGGTC TACCGCATGG CGCTGCGTAT GTTGAAAAAT
CGCGAACTCG CAGAAGAGGT TGTCCAGGAA GTTTTCTGGC GCGTCTGGCG CCGTAGCGCA
AGTTTTGACA TCGAGCGCGG GCGTGTGGCG CAGTGGTTGT TCGGCATTGC GCATAACCTG
TGCATCGATG AGTTGCGCCG CATGCGCGCC CGCCCGACTC AGGTCTATGA GGATGTTGAT
CATCCTGTGA TCCAGCAACT CGCCGATGAT CAGATTGATG TGCCGGAAGC AGCGTGGGCG
TTTGAACAGC GGCGCGTTAT CCGTGACGCA CTCGATCACC TTCCCGATAC GCAACGCGAG
GCAGTTGAAC TGGCATACTT CGGCGGGTTG TCGCACCAGG AAATCGCCAC GAAACTGAAT
CGACCGCTCG GAACGATCAA GACGCGTGTG CGCCTGGGGC TGCAGAAACT CGGTGCGCTG
TTAACAGCGC GCGGTCTCCA ACCAGGAGAT GCGTCGTAA
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| Protein sequence | MVNQSSDEYI RTTAAIPRTD TPDDHVLIAA IAQGDSSALE TLYDRYSSVV YRMALRMLKN
RELAEEVVQE VFWRVWRRSA SFDIERGRVA QWLFGIAHNL CIDELRRMRA RPTQVYEDVD
HPVIQQLADD QIDVPEAAWA FEQRRVIRDA LDHLPDTQRE AVELAYFGGL SHQEIATKLN
RPLGTIKTRV RLGLQKLGAL LTARGLQPGD AS
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