| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0085 |
|---|
| Symbol | |
|---|
| ID | 5207018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 99040 |
|---|
| End bp | 99429 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640593717 |
|---|
| Product | HEPN domain-containing protein |
|---|
| Protein accession | YP_001274476 |
|---|
| Protein GI | 148654271 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.471517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.275443 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGTT ACGCCGACTG GTTTGCGCAG GCGCTCCGTG ATCTGGAAAA GGCGCACCTC
GATCTTCAGC ACGAATACTG GGAGTGGGCA TGCTTTACAG CACAGCAAGC CGCAGAAAAA
GCAGTAAAGG CGCTCTTGAT GTCGCGCGGC ATGGATGCGT GGGGGCACGC AATAACCCCA
ATGCTACGCG CATTAAAGGA CCTCGATGTG CCGCTGCACC TGATCGAATA CGCTCAACTG
CTCGATGTTT TGTACATTCC CACTCGCTAC CCAAATGGAT TTTCCGTCGG TAAACCTGCG
GACTATTTCA GCGCGACCAA AGCGCAAGAG GCGCTCGATG CAGCAACCGC CATCATCCAG
TACTGTCAGG ATCATCTCCC TCGATCGTGA
|
|---|
| Protein sequence | MSRYADWFAQ ALRDLEKAHL DLQHEYWEWA CFTAQQAAEK AVKALLMSRG MDAWGHAITP
MLRALKDLDV PLHLIEYAQL LDVLYIPTRY PNGFSVGKPA DYFSATKAQE ALDAATAIIQ
YCQDHLPRS
|
|---|
| |