Gene RoseRS_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0065 
Symbol 
ID5206998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp81916 
End bp83046 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content64% 
IMG OID640593699 
Productsecreted hydrolase-like protein 
Protein accessionYP_001274458 
Protein GI148654253 
COG category[R] General function prediction only 
COG ID[COG5621] Predicted secreted hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.337885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTC GAATCTTCGC GCTCATCGCG GCGCTGACAA TCCTGGCGGC ATGCAGTGCA 
CCGGCGACGG TCGTTGAACC CCGCGCCCGG CTCGCCGTCG CCGAAGCAAT GGCAGGCGGC
AACGCCGACG GCTTCGCCCG CGCGACGGTG CCGCGTCCCT TCACCTTCCC CCGCGACCAC
GGACCACACC CGGAGTACGC CATCGAATGG TGGTACTACA CCGGCAACCT CCAGTCAGTC
GAGGGGCGAC GCTTCGGCTT TCAGTTCACC ATCTTTCGCA CCGGACTGAT GCCTGGTGAA
GCGGAGCGAT CGTCGGCGTG GGCTTCCAGC AGCATCTACA TGGCGCATTT CGCCCTCAGC
GACATCAGCG GCGGCAGGTT CTATGCCTTC GAACGGTTTA GTCGCGGCGC AGCCGGGCTT
GCAGGGGCGC AGAGCGAACC GTTCCGCGTC TGGCTCGAAG ACTGGAGCGC CGAAGGTCTC
GGCGCCGATG GGACGCCGAT GCGCCTGCGC GCTGCTGAAG ATGGTGTGGC GCTCGACCTG
ACCCTGACAG CCGGCAAACC TCCGGTATTG CAGGGAGACC GCGGTTTGAG CCAGAAGAGC
GCCGAGATCG GCAACGCATC GTACTACTAT TCCTTCACCC GCATGCCGAT CAGCGGAACG
GTGCGCATCG GCGAAACGCT GTATCAGGTC AGCGGATTGG GTTGGATGGA TCGCGAGTGG
AGCACCAGCG CGCTTGGCGA GGATCAGGTT GGCTGGGACT GGTTCGCGTT GCACCTGGAC
GATGGACGCG ACCTGATGTT CTACCGCCTG CGTCTGCGCA ATGGAGGCAT CGATCCATAC
AGCAAAGGAG TGCTGGTTGA TGTCGCCGGG AACGCGCGGC GTCTGAATCA CGATGAGGTG
CTGGCAGAAC CCCTCGATTA CTGGACAAGC CCGCGCAGCG GGGCAACCTA CCCGGCGCGC
TGGCGGCTGC GCGTGCCCGA TGAGGCGATT GACCTGACAC TGACGCCGCT GCTGGCGGAT
CAGGAACTGC CAGTCACCGT CGTCTACTGG GAAGGAGCGG TTGCAATCAG TGGCAGCGCC
GCAGGCAGCG GGTATATTGA GATGACCGGG TATACGCCGC AAGACCGGTA A
 
Protein sequence
MIIRIFALIA ALTILAACSA PATVVEPRAR LAVAEAMAGG NADGFARATV PRPFTFPRDH 
GPHPEYAIEW WYYTGNLQSV EGRRFGFQFT IFRTGLMPGE AERSSAWASS SIYMAHFALS
DISGGRFYAF ERFSRGAAGL AGAQSEPFRV WLEDWSAEGL GADGTPMRLR AAEDGVALDL
TLTAGKPPVL QGDRGLSQKS AEIGNASYYY SFTRMPISGT VRIGETLYQV SGLGWMDREW
STSALGEDQV GWDWFALHLD DGRDLMFYRL RLRNGGIDPY SKGVLVDVAG NARRLNHDEV
LAEPLDYWTS PRSGATYPAR WRLRVPDEAI DLTLTPLLAD QELPVTVVYW EGAVAISGSA
AGSGYIEMTG YTPQDR