| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0064 |
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| Symbol | |
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| ID | 5206997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 78141 |
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| End bp | 81905 |
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| Gene Length | 3765 bp |
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| Protein Length | 1254 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640593698 |
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| Product | methionine synthase |
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| Protein accession | YP_001274457 |
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| Protein GI | 148654252 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.496444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCTTC CGGAACCTCA CGCGGGCGCG TGGGGTTTTT TGCTGCACAA GCGAGAAAGC
GCAATCATCG CACCCGCCAG CCCGATCATC ACGTGCAGAC AGTTCGGATA TGAAGTATCA
CGAGGTGTTT CCTTGAAGAA GCCAACCTAC CTTGAAGCCC TGCGCGAGCG CGTCCTGATC
TACGACGGCG CTATGGGCAC CAGCATCGAT ACATTCCATC TCACGGCTGC GGACTATGGC
GGTGAAAACA CTTTCGGCGC CCGCGATTAT CTGGTGATGA CTCGCCCGGA TGTCATCGAA
CAGATCCACA CCTCGTTTCT GGAAGCAGGC GCAGATGTGC TCGAAACATG CACGTTCCAA
TCGACCCGCA TCCGGCTTGA GGAATGGGGG CTTGCCGATC AGACGCATGC GATCAATGTC
GCCGCTGCGC GCCTGGCGCG GCGCGTTGCT GATGCGTTCG AGGCGCGTGA TGGTCGTCCG
CGTTACGTCG CCGGCTCGAT GGGACCGACC GGCAAGTTGC CCTCTTCCGA TGATCCGTCG
CTCTCTGATA TAACGTTCGA TCAACTCTCC GATATCTTCT ACGAACAGGC GGTGGCGCTG
ATCGAAGGCG GGGTCGATGT GCTGCTGGTC GAGACGAGCG TTGACATTCT TGAAGTGAAA
GCAGCACTCG ACGGCATTCG TCGCGCGAAA GCGGATCTTA ACCGTCCTGA TGTCGCCGTG
CAGGCGCAGG TGTTCCTCGA TCTCTCCGGC AAGATGCTGC TTGGCACCGA GGTGCCAGCG
CTCGTTGCCA CCCTGGAAGC GATGCCGGTC GATGTCATCG GGCTGAACTG TTCAACCGGT
CCTGAACATA TGCGCGAGGC GATCCGGTAT ATGACCCGCC ACTCGCGCAA GCCGATCTCC
TGCATTCCCA ACGCCGGTCT GCCGATCGAG GTGAATGGCG AGACGGTCTA TCCGATGGAG
CCGGAGCCGT TCGCCCGCAT TCTGGGGGAG TATGTCCACG AGTATGGAGT GGCGGTCGTT
GGAGGATGCT GCGGCACCCG CCCGGCGCAC ATTCGCCGTT TGCGCCAGGT AGTCGGCGCG
GCGACGCCGC CGAAAGTGCG TGACATCGAG TACATCCCCA GCGTCTCGTC GGGGGTGCGC
GCGGCTGCAT TGCGCCAGGA AGGGACGTTG ACCATTATCG GCGAACGGGT CAACACCCTC
GGTTCGCGTA AAGTCAAGCG CCTGCTGCTG AACGATGACT ACGACGGCGT GCTTGAAGTC
GCGCGCGAGC AGGTCGATTC AGGATCACAT ATTCTCGATG TGTGCGTGGC AATGACCGAG
CGATCCGACG AGCGTGAGAT GATGGTCAGA CTGTTGAAGA AGTTGACCAT GAACATCGAA
CTGCCGCTGG CGATCGATAC GACCGAAGCC GATGTGCTCA ATGCGGCGCT GGCGATCTAC
CCCGGTCGCG CGATTGTCAA CTCGGTGTCG CTCGAAGGCG GTCGTGGCGA TAAGATTGAC
CGCACCATGC CGCTGGTGGC GCGCTATGGT GCGGCAACGA TCGCCATGAC CATCGATGAA
GAAGGTATGG CGCACACTGC CGAACGTAAA CTGGCAATCG CCCGGCGTAT CGCTCAGATT
GCGCAGGACG AGTACGGCGT GCCGCCCGAA GCGCTGATCT TCGATGTGTT GACTTTCCCT
ATCACGACCG GTCAACCCGA GTTGCGCCGC GCAGCGATCG AAACAATCGA GGGTATTCGC
CTGGTGAAGC AGCATATTCC CGGCTGTTTC ACCACCCTCG GCGTCAGCAA CCTGAGTTTC
GGCGTCGCAC CGTACGCGCG TGCAGCGCTC AACTCGGTGT TTCTGAAACA TGCAGTCGAT
GCCGGTCTCG ATACGGCGAT CATCAATCCG GCGCATGTGA TGCCGTATGC CGAGATTCCG
CCGGAGCAGA TCAGGGTCTG CGAAGACCTG ATCTTCGACC GCGACGAGCA GGCGCTGGCG
CGGTTCATTC AGTTCTTCGA GGAGCACGGA TCGGCAGCAA AAACCGAGCG CGTCGATCCG
ACGGAGGGGA TGACAGCGGC GCAGCGCGTC CACTGGAAGA TCGTGCACCG CAAGAAAGAG
GGCATCGAGC AGGATATCGA TACGGTCATC GCTGAACGCA TCCGCGAGGC GGAGATGCGT
GCAGGCATCC ACGATAGCGC CCTCGATCCG GCGCATCCCT CGCGGGAGGC GATCTTCGCC
TCGCCCTTCC GCAATAGTGC TGCGGTTGAT GTGCTCAACA CTGTGCTGCT CCCTGCGATG
AAGGAGGTCG GCGACCTGTT CGGCGCGGGT CAGTTGATCC TTCCCTTCGT ATTGCAGAGC
GCCGAGGTGA TGAAGAAAGC GGTTGCGCAC CTGGAGCAGT ATCTGGAAAA ACTCGAAGGG
GTCACCAAAG GCAAGATCGT CCTGGCGACG GTGTACGGCG ATGTTCACGA CATCGGCAAA
AATCTGGTTC ATACGATCCT TGCCAACAAC GGGTATACGG TGTACGACCT GGGGAAGCAG
GTGCCGATCA ACACCATTAT CGAGAAGGCG GTCGAAGTCA ACGCCGACGC GATTGGTCTG
TCGGCGCTTC TGGTGAGCAC CTCGAAGCAG ATGCCGCTCT GCGTGCAGGA ATTGCACCGG
CGTGGTCTCA AGTTCCCGGT GCTGGTCGGC GGTGCGGCGA TCAACAAACA GTACGGGCAG
CGCATTCTGT TCGTTGATGA CCACACTCCT TACGAACCTG GCGTCTTCTA CTGTAAAGAC
GCATTCGAGG GTCTGGAAAC GGTCGACGCT CTGGTGGATC CGTCCACCCG CGCAACATTC
ATCGAACGCA CGAAAGCGGA AGCAGCTGAG GCGCTCGGCA AGAAGCAACG CGGTCGCGTG
GCGCTGGCGG AACTGGGGCG CGCAACATTG AGCGATACGG CGAAGGTGCG CTCGGCGGTG
CGAACCGATG TGCCGGTTCC GACGCCGCCG TTCTGGGGTG CGCGCGTGTT GACGCGCATC
AAACTGGCGG ATGTGGTCGA ATGCCTGGAT CGCAATGCGC TCTACCGGCT TCAGTGGGGA
GCAAAGAATG CGAAAGGCGA AGAGTGGGAA CACCTGAAGG CGGATTTTGA TGCAAAAGTG
CGCGATCTGA TCCGCGAAGC CGAACGCGAT GGCTGGCTCG AGCCGAAAGT GGTCTATGGC
TACTACCCCT GCCAGAGTGA CGGGCACGAG GTTATTGTCT ACGATCCGCC ATCGGTGCTC
AACGGCGCCC AGCCGCGCGA ACTCACGCGC TTCGTCTTCC CGCGTCAACC GGAGCGTGAA
CGTCTCTGCC TGGCTGACTA TTTCCGTTCA CGCGAGAGCG GCGAGTACGA TGTGGTTGGG
TTGCAGATCG TAACCATGGG GCGCAAAGTC GACGACCTGA CCGAGACGTT GCAGCAATCC
GGCGATTATT CGCGTGCGTA CTTCATCCAT GGGCTGGGGG TATCGCTGGC GGAGGCGCTC
GCCGAGTATA CGAACCGTCT CATCCGCCGG CAACTGGGGC TGAAAGGAAC CCAGGGCAAG
CGTTACTCCT GGGGGTATCC CGCCTGCCCC GACCTGGAAG AGCACGAGAA GTTGTTCAGG
GTGCTTCCAG CGGCTGAGAT CGGCGTGACG CTCACCGAAG CCTGGCAACT GGTGCCGGAG
CAGAGCACGG CGGCGATTGT GATCCACCAT CCTGAGGCGA AATACTTCTC GATCGGCTCT
GCCCGCGAAC GCGCTGAAGA GGATGTCGCC GAAACGCTGG CGTAA
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| Protein sequence | MRLPEPHAGA WGFLLHKRES AIIAPASPII TCRQFGYEVS RGVSLKKPTY LEALRERVLI
YDGAMGTSID TFHLTAADYG GENTFGARDY LVMTRPDVIE QIHTSFLEAG ADVLETCTFQ
STRIRLEEWG LADQTHAINV AAARLARRVA DAFEARDGRP RYVAGSMGPT GKLPSSDDPS
LSDITFDQLS DIFYEQAVAL IEGGVDVLLV ETSVDILEVK AALDGIRRAK ADLNRPDVAV
QAQVFLDLSG KMLLGTEVPA LVATLEAMPV DVIGLNCSTG PEHMREAIRY MTRHSRKPIS
CIPNAGLPIE VNGETVYPME PEPFARILGE YVHEYGVAVV GGCCGTRPAH IRRLRQVVGA
ATPPKVRDIE YIPSVSSGVR AAALRQEGTL TIIGERVNTL GSRKVKRLLL NDDYDGVLEV
AREQVDSGSH ILDVCVAMTE RSDEREMMVR LLKKLTMNIE LPLAIDTTEA DVLNAALAIY
PGRAIVNSVS LEGGRGDKID RTMPLVARYG AATIAMTIDE EGMAHTAERK LAIARRIAQI
AQDEYGVPPE ALIFDVLTFP ITTGQPELRR AAIETIEGIR LVKQHIPGCF TTLGVSNLSF
GVAPYARAAL NSVFLKHAVD AGLDTAIINP AHVMPYAEIP PEQIRVCEDL IFDRDEQALA
RFIQFFEEHG SAAKTERVDP TEGMTAAQRV HWKIVHRKKE GIEQDIDTVI AERIREAEMR
AGIHDSALDP AHPSREAIFA SPFRNSAAVD VLNTVLLPAM KEVGDLFGAG QLILPFVLQS
AEVMKKAVAH LEQYLEKLEG VTKGKIVLAT VYGDVHDIGK NLVHTILANN GYTVYDLGKQ
VPINTIIEKA VEVNADAIGL SALLVSTSKQ MPLCVQELHR RGLKFPVLVG GAAINKQYGQ
RILFVDDHTP YEPGVFYCKD AFEGLETVDA LVDPSTRATF IERTKAEAAE ALGKKQRGRV
ALAELGRATL SDTAKVRSAV RTDVPVPTPP FWGARVLTRI KLADVVECLD RNALYRLQWG
AKNAKGEEWE HLKADFDAKV RDLIREAERD GWLEPKVVYG YYPCQSDGHE VIVYDPPSVL
NGAQPRELTR FVFPRQPERE RLCLADYFRS RESGEYDVVG LQIVTMGRKV DDLTETLQQS
GDYSRAYFIH GLGVSLAEAL AEYTNRLIRR QLGLKGTQGK RYSWGYPACP DLEEHEKLFR
VLPAAEIGVT LTEAWQLVPE QSTAAIVIHH PEAKYFSIGS ARERAEEDVA ETLA
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