Gene RoseRS_0063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0063 
Symbol 
ID5206996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp74133 
End bp77705 
Gene Length3573 bp 
Protein Length1190 aa 
Translation table11 
GC content64% 
IMG OID640593697 
Producttranscriptional regulator 
Protein accessionYP_001274456 
Protein GI148654251 
COG category[R] General function prediction only 
COG ID[COG3899] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.82825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.766346 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCGC CGCTCAGGAT TGCGTTATTC GGCGCGCTGA CCGTACAGAT CGGTGATCGC 
ACGCTACCCG ACTCCGTCTG GCGTTCCCGG CAGGAGCAGC GTCTGCTTGC CATTCTCGCT
GCAACCCGGG GGCGGGTTAT TGCTGCCGGG CGATTGTGCG AATGGCTGTG GCCTGATTCG
GACAGCGCCA GCGCATCGGT AAACCTGCGG AGCGCAATCA GCAACCTGCG TCGTGTGCTG
GAACCAGAGG CTGACCGCGC TTCACGCCGG TATATTCTGA CCCGCTCCGG CGGGTATGCC
TGGAACAGAG AGAGCGGCGC GTGGATCGAT GTCGATGAGT TTCTAACGCT GACCGAATCA
CTCGCCGGTG GTCAGACGAC CGGTTCGATG GAGCAGGGTG AGGCGGACCT GGAGCGGGCG
ATTACGCTCT ATCGCGGCGA CTTTCTCGAA GATGAGCAGG AACTGGCGTG GGCGGCGATG
GAGCGTGAGC GGTTGCGTGC ACGCTACCTC GACGCGCTCC GTCGTGTGGC GGAGATCAAA
CTCGACCGCG GCGACCCGAT GGCTGCGGCG GCGCTTGCCG GTCGCGGCAT TGCCATTGCG
CCTCTCACCG AACCGCTCTG GCGCATCCTG ATGCTGGCAC AGGCGCGGTC AGGCGACACG
GCCGGCGCGC TTCAGAGTTA CGAGCGCTAC CGTCATCTGC TGGACCACGA GTTGGGCGCT
GCGCCGTCGC CTCAGACACA GGCGCTGCAT ATGGCGATCC TGCGCGGCGA TCCTGGTTCC
TATGCGCCTG CTGCGGTCTC CTCATCGCAC GAAAACCGTC ATGATCGACA GCGGATCGAA
CCGCGCAGTC CACGTGCCGG ACAACGTTCT CCGGGATCGG CAGCAACGCC GATTGTCGGA
CGTCAGGAGG AACTGGCGTT ATTGCACCGC TGGCTCGCCG ATCTTGATCG GCGTAGCGGC
GGAATGGTCA CCATCGTCGG TGAAGCGGGG ATTGGGAAGA CGCGCCTGAT AGCAGAAACG
CTGCGCACTG CCGCCGACCG GGGCGCATTT ACGCTTGAAC TGCGCGCCAC GCCGCTGGAT
CAGGGGTTGC CCTTTGCTGC GGTCGGAGAG ATGCTGCGCC CCTTGCTGCG CAATGTACCG
GAGTATCGTC TTCGTCAACT GCCGCAGTTT GCACTGGCGC AGATCGCCGA TCTTTTTCCG
GTGTTGCGGG AACGGTTGCC GGATCTGCCT GAACTGTCGG ATGTGCCGCC TGAGGAACGG
CGTAACCGAC AGATCGACGG TCTGTGTGAA CTGGCGCTTG CGCTGGCGCG CACACTCCCG
CTGGTCGTTG CGCTCGATGA TGCGCAGTGG GCGGACGATG CAACGCTGGC GACGGTCGGG
CGCCTCGCCC GTCAGGCGTC GCGCCGGGCG TTGTTGCTCA TCCTGGCATA CCGCGCCGAT
GAACTGAGTG ATAACCCGGC GCTCCACAAT CTGTTGCGCA CCCTGGGACG CGATATGATC
CTGCGTCCGC TGGTGCTGGG TCGCCTCGAT GCATCGGCAG TTGCTGAACT TCTCGCCGGA
CTTGCCGGAG TTGAGATCGG GCGGGTCGCA CATCTGGCGC CCCAACTGGT CGCCAGCACC
GGCGGCAATC CTCTGGCATT GATGGTGACA GTCCAGGCAT TACTGGAGAG TCGCGGGGCG
CCATCGCTCG CTGCGTTGCT GCCCGACCTC GAAGCAGGTA TGCCGTTTCC CGATCCGACC
GAAGCGCCGC AGATGCGTGA ACTGGTGCGG GCGCGCATTG ATCGATTGCC GCCGCACGCA
CGCGATCTGG CAGAGCATCT GGCGCTGATC AGTCGTCCGG CGTCACTCGA CCTGATCGAA
CGTCTGGGGG GCGCGGATGC GCTCGAAGCC GCGCAGATCC TGCTTGAGCG TCAGATACTT
ATTGAGAATG ACGATACGCA CCTTGCGTTC AACCATGACC TGGTGCGCTC GATCATCGCG
GCCACCCTCT CTGCGCCGCA GCGTCGGCGG TTGCACCATC GGATCGGCGC CGCGATGGCA
GCGCTTGAAG GGCATCGACC GGAGCGTGCT GCCGAGATCA CCTATCATTT TTGCCAGGCT
GGGCGTTCTG CCGATCGCGA CGTGCTGCGC TATGCGATTG ATGCTGGCGA TCATGCGCGG
CGCGCGTTCG GGTATCGTCA TGCGTTGCAC CACTATGATG CCGCTATTGA AGCGGGCGAA
CGTCTCGGCG CTGAGGCGCC GGTCGAGATG ATGCAACGCG CCTTTGCCGG ACGGTTGCTG
ACGTGCGAGA CGCTGCTGGA CTGGAACGGG TTGGAAGAAA CCTCTGCGCG CTATGAGCGC
TGGGCGACGC AGCGTGGTGT AACGCCGCCA ACGCTCGTTG CGCCGCGTCG GTTGGTGCTG
CTGCGTGCGC TGATGGGCGA TCTGGCGGGC GCCGCTGCAA TCAGCGCCGC GCATGCAGCG
CGCACACAAA AAGGCGGTTG TGTCGAACCG CTCCCCTCGA TTGCTGATAT GCTCTGGCGC
ACGGCGTTGA TCCTGCAGCC CGATCCGCTT CCTGCCGCTG CCGAGCGCTC ACGCGCTTCC
CTGCGCGACC GTCGCAGCAG GGTCGATGAT CCGCTTTTCG TCCAGGCGGA TACTGTTTCA
CGTGAAACAG ATGAACAGGG CGTCCAGCAC GCCGATGTGC TTCCTTCGAA TGATGTTGAT
GCGTCCTGGC GGACATTCCC GTCATTCACT CCGGCCCCTC CTGTTCCAGG CAATCCAGCG
GAAGAACTGC CGGAACTGCT CGGACCGGAC GAAGCGGCAG CGGCGCTGTT CCAGATCGGA
TGGGCGGCGT TGATGCAGGG ATTGCTGCGC GACGCACGCC CTTGTCTGAC ACAATCATAT
ACGCTGGCGG TTGAAACCGG TCAGGCGCCG GCCGCCGTCG TCTCGGCGTT GCAACTGGCG
CACCTGAACG CGCTCGCTGG CAAGCCTGAC GAAACGACTA TCTGGCTGGA GCGCAGCCTG
GAAACCGCCG CGCGAGCATC CGAAGCGGCA TGGGCCTCGA TCTGGCCCCG CATCCATCAG
GGCTTCCTCT GGTTGATCGA TGATCGCCTG GCGCTGGCGG AACAACGCTT TGTTGAAATG
GCAGCGCGTC TCGCTGGCGT AGCGGCATTT CAGTCGCACC GCGCCAGTGT GGTCGTGGGG
ATGGGCATGG TAGCGCTGGC GCGCGGCGAC CTGACCGGCG CCGATGCGTA TTTTCACGAG
GCGTTGCGAG CGCCGCATCA ACTGTACGGT TTCATCTATG TCAGCGCGCA CCTTGGTATA
GCACGCCTCG CAGCGTTGCG CAACGACCTG CCGGGGGCGC GGACGATGCT GCTGCACACC
CTCCACTACA CGGTGCAACG GGCGCTCCTG CCGGAGTATG TCCGCACCGT CATCGAAGTT
GCCCGCATCG AACGTGACTT CGGCGATCCT GCACCGGTAC TGGCGCATCT GCGCAGTGCC
GCTCGTCTTG CACGCAGCGC CGGACTTGCG CCGCTCGCCG CAGCGGCATC TGCTCTGTCT
ACCCGTCTGG AGGAGAGTCA TCGTGTCCCC TGA
 
Protein sequence
MDAPLRIALF GALTVQIGDR TLPDSVWRSR QEQRLLAILA ATRGRVIAAG RLCEWLWPDS 
DSASASVNLR SAISNLRRVL EPEADRASRR YILTRSGGYA WNRESGAWID VDEFLTLTES
LAGGQTTGSM EQGEADLERA ITLYRGDFLE DEQELAWAAM ERERLRARYL DALRRVAEIK
LDRGDPMAAA ALAGRGIAIA PLTEPLWRIL MLAQARSGDT AGALQSYERY RHLLDHELGA
APSPQTQALH MAILRGDPGS YAPAAVSSSH ENRHDRQRIE PRSPRAGQRS PGSAATPIVG
RQEELALLHR WLADLDRRSG GMVTIVGEAG IGKTRLIAET LRTAADRGAF TLELRATPLD
QGLPFAAVGE MLRPLLRNVP EYRLRQLPQF ALAQIADLFP VLRERLPDLP ELSDVPPEER
RNRQIDGLCE LALALARTLP LVVALDDAQW ADDATLATVG RLARQASRRA LLLILAYRAD
ELSDNPALHN LLRTLGRDMI LRPLVLGRLD ASAVAELLAG LAGVEIGRVA HLAPQLVAST
GGNPLALMVT VQALLESRGA PSLAALLPDL EAGMPFPDPT EAPQMRELVR ARIDRLPPHA
RDLAEHLALI SRPASLDLIE RLGGADALEA AQILLERQIL IENDDTHLAF NHDLVRSIIA
ATLSAPQRRR LHHRIGAAMA ALEGHRPERA AEITYHFCQA GRSADRDVLR YAIDAGDHAR
RAFGYRHALH HYDAAIEAGE RLGAEAPVEM MQRAFAGRLL TCETLLDWNG LEETSARYER
WATQRGVTPP TLVAPRRLVL LRALMGDLAG AAAISAAHAA RTQKGGCVEP LPSIADMLWR
TALILQPDPL PAAAERSRAS LRDRRSRVDD PLFVQADTVS RETDEQGVQH ADVLPSNDVD
ASWRTFPSFT PAPPVPGNPA EELPELLGPD EAAAALFQIG WAALMQGLLR DARPCLTQSY
TLAVETGQAP AAVVSALQLA HLNALAGKPD ETTIWLERSL ETAARASEAA WASIWPRIHQ
GFLWLIDDRL ALAEQRFVEM AARLAGVAAF QSHRASVVVG MGMVALARGD LTGADAYFHE
ALRAPHQLYG FIYVSAHLGI ARLAALRNDL PGARTMLLHT LHYTVQRALL PEYVRTVIEV
ARIERDFGDP APVLAHLRSA ARLARSAGLA PLAAAASALS TRLEESHRVP