Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0063 |
Symbol | |
ID | 5206996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 74133 |
End bp | 77705 |
Gene Length | 3573 bp |
Protein Length | 1190 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640593697 |
Product | transcriptional regulator |
Protein accession | YP_001274456 |
Protein GI | 148654251 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.82825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.766346 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCGC CGCTCAGGAT TGCGTTATTC GGCGCGCTGA CCGTACAGAT CGGTGATCGC ACGCTACCCG ACTCCGTCTG GCGTTCCCGG CAGGAGCAGC GTCTGCTTGC CATTCTCGCT GCAACCCGGG GGCGGGTTAT TGCTGCCGGG CGATTGTGCG AATGGCTGTG GCCTGATTCG GACAGCGCCA GCGCATCGGT AAACCTGCGG AGCGCAATCA GCAACCTGCG TCGTGTGCTG GAACCAGAGG CTGACCGCGC TTCACGCCGG TATATTCTGA CCCGCTCCGG CGGGTATGCC TGGAACAGAG AGAGCGGCGC GTGGATCGAT GTCGATGAGT TTCTAACGCT GACCGAATCA CTCGCCGGTG GTCAGACGAC CGGTTCGATG GAGCAGGGTG AGGCGGACCT GGAGCGGGCG ATTACGCTCT ATCGCGGCGA CTTTCTCGAA GATGAGCAGG AACTGGCGTG GGCGGCGATG GAGCGTGAGC GGTTGCGTGC ACGCTACCTC GACGCGCTCC GTCGTGTGGC GGAGATCAAA CTCGACCGCG GCGACCCGAT GGCTGCGGCG GCGCTTGCCG GTCGCGGCAT TGCCATTGCG CCTCTCACCG AACCGCTCTG GCGCATCCTG ATGCTGGCAC AGGCGCGGTC AGGCGACACG GCCGGCGCGC TTCAGAGTTA CGAGCGCTAC CGTCATCTGC TGGACCACGA GTTGGGCGCT GCGCCGTCGC CTCAGACACA GGCGCTGCAT ATGGCGATCC TGCGCGGCGA TCCTGGTTCC TATGCGCCTG CTGCGGTCTC CTCATCGCAC GAAAACCGTC ATGATCGACA GCGGATCGAA CCGCGCAGTC CACGTGCCGG ACAACGTTCT CCGGGATCGG CAGCAACGCC GATTGTCGGA CGTCAGGAGG AACTGGCGTT ATTGCACCGC TGGCTCGCCG ATCTTGATCG GCGTAGCGGC GGAATGGTCA CCATCGTCGG TGAAGCGGGG ATTGGGAAGA CGCGCCTGAT AGCAGAAACG CTGCGCACTG CCGCCGACCG GGGCGCATTT ACGCTTGAAC TGCGCGCCAC GCCGCTGGAT CAGGGGTTGC CCTTTGCTGC GGTCGGAGAG ATGCTGCGCC CCTTGCTGCG CAATGTACCG GAGTATCGTC TTCGTCAACT GCCGCAGTTT GCACTGGCGC AGATCGCCGA TCTTTTTCCG GTGTTGCGGG AACGGTTGCC GGATCTGCCT GAACTGTCGG ATGTGCCGCC TGAGGAACGG CGTAACCGAC AGATCGACGG TCTGTGTGAA CTGGCGCTTG CGCTGGCGCG CACACTCCCG CTGGTCGTTG CGCTCGATGA TGCGCAGTGG GCGGACGATG CAACGCTGGC GACGGTCGGG CGCCTCGCCC GTCAGGCGTC GCGCCGGGCG TTGTTGCTCA TCCTGGCATA CCGCGCCGAT GAACTGAGTG ATAACCCGGC GCTCCACAAT CTGTTGCGCA CCCTGGGACG CGATATGATC CTGCGTCCGC TGGTGCTGGG TCGCCTCGAT GCATCGGCAG TTGCTGAACT TCTCGCCGGA CTTGCCGGAG TTGAGATCGG GCGGGTCGCA CATCTGGCGC CCCAACTGGT CGCCAGCACC GGCGGCAATC CTCTGGCATT GATGGTGACA GTCCAGGCAT TACTGGAGAG TCGCGGGGCG CCATCGCTCG CTGCGTTGCT GCCCGACCTC GAAGCAGGTA TGCCGTTTCC CGATCCGACC GAAGCGCCGC AGATGCGTGA ACTGGTGCGG GCGCGCATTG ATCGATTGCC GCCGCACGCA CGCGATCTGG CAGAGCATCT GGCGCTGATC AGTCGTCCGG CGTCACTCGA CCTGATCGAA CGTCTGGGGG GCGCGGATGC GCTCGAAGCC GCGCAGATCC TGCTTGAGCG TCAGATACTT ATTGAGAATG ACGATACGCA CCTTGCGTTC AACCATGACC TGGTGCGCTC GATCATCGCG GCCACCCTCT CTGCGCCGCA GCGTCGGCGG TTGCACCATC GGATCGGCGC CGCGATGGCA GCGCTTGAAG GGCATCGACC GGAGCGTGCT GCCGAGATCA CCTATCATTT TTGCCAGGCT GGGCGTTCTG CCGATCGCGA CGTGCTGCGC TATGCGATTG ATGCTGGCGA TCATGCGCGG CGCGCGTTCG GGTATCGTCA TGCGTTGCAC CACTATGATG CCGCTATTGA AGCGGGCGAA CGTCTCGGCG CTGAGGCGCC GGTCGAGATG ATGCAACGCG CCTTTGCCGG ACGGTTGCTG ACGTGCGAGA CGCTGCTGGA CTGGAACGGG TTGGAAGAAA CCTCTGCGCG CTATGAGCGC TGGGCGACGC AGCGTGGTGT AACGCCGCCA ACGCTCGTTG CGCCGCGTCG GTTGGTGCTG CTGCGTGCGC TGATGGGCGA TCTGGCGGGC GCCGCTGCAA TCAGCGCCGC GCATGCAGCG CGCACACAAA AAGGCGGTTG TGTCGAACCG CTCCCCTCGA TTGCTGATAT GCTCTGGCGC ACGGCGTTGA TCCTGCAGCC CGATCCGCTT CCTGCCGCTG CCGAGCGCTC ACGCGCTTCC CTGCGCGACC GTCGCAGCAG GGTCGATGAT CCGCTTTTCG TCCAGGCGGA TACTGTTTCA CGTGAAACAG ATGAACAGGG CGTCCAGCAC GCCGATGTGC TTCCTTCGAA TGATGTTGAT GCGTCCTGGC GGACATTCCC GTCATTCACT CCGGCCCCTC CTGTTCCAGG CAATCCAGCG GAAGAACTGC CGGAACTGCT CGGACCGGAC GAAGCGGCAG CGGCGCTGTT CCAGATCGGA TGGGCGGCGT TGATGCAGGG ATTGCTGCGC GACGCACGCC CTTGTCTGAC ACAATCATAT ACGCTGGCGG TTGAAACCGG TCAGGCGCCG GCCGCCGTCG TCTCGGCGTT GCAACTGGCG CACCTGAACG CGCTCGCTGG CAAGCCTGAC GAAACGACTA TCTGGCTGGA GCGCAGCCTG GAAACCGCCG CGCGAGCATC CGAAGCGGCA TGGGCCTCGA TCTGGCCCCG CATCCATCAG GGCTTCCTCT GGTTGATCGA TGATCGCCTG GCGCTGGCGG AACAACGCTT TGTTGAAATG GCAGCGCGTC TCGCTGGCGT AGCGGCATTT CAGTCGCACC GCGCCAGTGT GGTCGTGGGG ATGGGCATGG TAGCGCTGGC GCGCGGCGAC CTGACCGGCG CCGATGCGTA TTTTCACGAG GCGTTGCGAG CGCCGCATCA ACTGTACGGT TTCATCTATG TCAGCGCGCA CCTTGGTATA GCACGCCTCG CAGCGTTGCG CAACGACCTG CCGGGGGCGC GGACGATGCT GCTGCACACC CTCCACTACA CGGTGCAACG GGCGCTCCTG CCGGAGTATG TCCGCACCGT CATCGAAGTT GCCCGCATCG AACGTGACTT CGGCGATCCT GCACCGGTAC TGGCGCATCT GCGCAGTGCC GCTCGTCTTG CACGCAGCGC CGGACTTGCG CCGCTCGCCG CAGCGGCATC TGCTCTGTCT ACCCGTCTGG AGGAGAGTCA TCGTGTCCCC TGA
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Protein sequence | MDAPLRIALF GALTVQIGDR TLPDSVWRSR QEQRLLAILA ATRGRVIAAG RLCEWLWPDS DSASASVNLR SAISNLRRVL EPEADRASRR YILTRSGGYA WNRESGAWID VDEFLTLTES LAGGQTTGSM EQGEADLERA ITLYRGDFLE DEQELAWAAM ERERLRARYL DALRRVAEIK LDRGDPMAAA ALAGRGIAIA PLTEPLWRIL MLAQARSGDT AGALQSYERY RHLLDHELGA APSPQTQALH MAILRGDPGS YAPAAVSSSH ENRHDRQRIE PRSPRAGQRS PGSAATPIVG RQEELALLHR WLADLDRRSG GMVTIVGEAG IGKTRLIAET LRTAADRGAF TLELRATPLD QGLPFAAVGE MLRPLLRNVP EYRLRQLPQF ALAQIADLFP VLRERLPDLP ELSDVPPEER RNRQIDGLCE LALALARTLP LVVALDDAQW ADDATLATVG RLARQASRRA LLLILAYRAD ELSDNPALHN LLRTLGRDMI LRPLVLGRLD ASAVAELLAG LAGVEIGRVA HLAPQLVAST GGNPLALMVT VQALLESRGA PSLAALLPDL EAGMPFPDPT EAPQMRELVR ARIDRLPPHA RDLAEHLALI SRPASLDLIE RLGGADALEA AQILLERQIL IENDDTHLAF NHDLVRSIIA ATLSAPQRRR LHHRIGAAMA ALEGHRPERA AEITYHFCQA GRSADRDVLR YAIDAGDHAR RAFGYRHALH HYDAAIEAGE RLGAEAPVEM MQRAFAGRLL TCETLLDWNG LEETSARYER WATQRGVTPP TLVAPRRLVL LRALMGDLAG AAAISAAHAA RTQKGGCVEP LPSIADMLWR TALILQPDPL PAAAERSRAS LRDRRSRVDD PLFVQADTVS RETDEQGVQH ADVLPSNDVD ASWRTFPSFT PAPPVPGNPA EELPELLGPD EAAAALFQIG WAALMQGLLR DARPCLTQSY TLAVETGQAP AAVVSALQLA HLNALAGKPD ETTIWLERSL ETAARASEAA WASIWPRIHQ GFLWLIDDRL ALAEQRFVEM AARLAGVAAF QSHRASVVVG MGMVALARGD LTGADAYFHE ALRAPHQLYG FIYVSAHLGI ARLAALRNDL PGARTMLLHT LHYTVQRALL PEYVRTVIEV ARIERDFGDP APVLAHLRSA ARLARSAGLA PLAAAASALS TRLEESHRVP
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