Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0060 |
Symbol | |
ID | 5206993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 69077 |
End bp | 72610 |
Gene Length | 3534 bp |
Protein Length | 1177 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640593694 |
Product | UvrD/REP helicase |
Protein accession | YP_001274453 |
Protein GI | 148654248 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.508286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTTC GCCGACAACA GATCCGCGCT GCGGCTTGTG ATGTGCGCCG CTCCTACTAT GAGCGCGTCG GCAGTGATGA TCTCAACCAT CCGCTGTCGC TTGATACCCT TGTAGAGGAA ATCTGGGGAT TGACGGTCAT CCGGGATGTG CTCGCCGCCG GTATTCAGGG GAAGGTCGAG CCGGAACACG ACGTCATCCG GGTGCAGCGC GATCTTTCAC CGACCCGTCA GCGCTTCGTG ATTGCCCACG AGATTGGTCA TGTGCACCTC GAAGGGTTGG ATGCCGGCCC GTTCCGCGAT ACCGACGAAA CGCTCGATGA GTGTGCCGCA GGCGCCGACG ATGAGACGGC GGTTCGTTCG TACAACCGGC GCGAGCGCCG CGAACAGGAG GCGAACCTGT TTGCGCTTGA ATTGCTCGTG CCGGCGGAGG AACTCTGGCA GGCGGTTCAG CAGGCGGACT GGAGCATTGA GTCGCTTGCA GCGCAGTTTG CCGTCTCAAC CGATGCCATC CGCGCGCAAC TGGTGAATGT CTGCTGTCTC GATCCGCTGA CACCACCCGA CGGATCGACC GTTACCCGAC ATACGTCGTT CACGCCGGAC CCGGAGCAAC AGGCGGCAGT CGATGCGCCG CTGCCGCTGC TGCTTGCGGC TGGACCGGGT ACCGGGAAGA CGCGCAGCAT TGTGGCGAAG TATGTGTCAC TGGTGCATCA GGGGGTCGAT CCGGCATCGA TCCTGGCGCT GACGTTTTCG AACAGGGCGG CGGAGGAGAT GCGCGAGCGG ATCATTGCTG CACTGCGTCA GGCAGCGCCA CGCCTTGCCG GACGTGTGGA GATCAGTACG TTTCACTCGT GGGGACTGAA TATCCTGCGC ATCTACGGGG CGCGACTGGG GTTGCCGGCG GATGTGCGGC TTCTCGATAC TGCCGATCTC TTTCTTCTGC TCTCGAAGCG CCTGGACGAT CTGCGCCTGG CGTATTTCAA AGACCTGCGC GAACCGACCC GTCATCTGGT GACGATTATT CAGGCGATCA GCCGGATCAA GGATGAACTG TGGTCGCCGG AAGAGTTCGC GCGTGCGGCG GAGCAGGAAG CGGAGCGTCT GATCGGACAG GCGGAGCAGG ATCATCCTGG CGCTTCGCGC AAAGCCACCG AAGCGCGCGA GCGCGCGGTG CGACGGGCGA CCGCGTTACG CGAACTGGCA CAGATCTACC CGCGCTACGA AGCGATCCTG CGCGAGGCGG GCGCACTGGA CTATGGCGAT CTGATTGTGT TACCGGTGAG GGCGCTGCAC GATCCGGCAA TCGCTGCCGA TCTCCGTCGG CGTTACCACT ACCTTCTGGT CGATGAATTT CAGGATATCA ACTACGCTTC GGGCGAGTTG ATCCGGCTGC TCGATGGTGG ACGCGGACGG GTGTGGGCGG TCGGCGATGC CTGGCAGAGC ATCTATCGCT TTCGCGGCGC ATCGGCGGCC AATCTCGATG AGTTCCTGCA CCATTACCCG ACGGCGCAGG TTCGCTATCT GACGCGCAAC TACCGCTCGT TGCAACCGAT CCTCGATGCC AGCGCCGCAG TGATGGTCAG CGATCCTCGC GCTGCAACCC GTCCGTTGCT GCAGGCGCAA CGCACCGGCG GCGGTCACGC AGTTATCGAA CTAGTTGCAC CGCACAGTCA GGATGAACAT ACAGCAATTG CGCACGACAT TCTGCGCCGG GCGCGATCCG GTCGAGGCAG GGGATTGCCG CGCTGCGCCG TGCAACCGTG GATGCTGCAC TGCCGGAAGA TGCGACGTGC ACTGCGTCGT CCACCCCTGT TCATTCGTCG CTGGCGTTTC CACGACCATG CAGTGCTCTG CCGCACCCAC GAACAGGCGA GCGCAATTGC TGCTGTGCTC GAAGCGCACG GCATTCCGGT CGATCATCCG GGCAACGTGT TCGAGGCGTC AGAGGTGAAG GATGTCCTGG CAATCTGCGC CCAGATTGGA TCGACGAACA GCGCCGGTCT GCTGCGAGCG TTGACGATGC CCGATCACCG TCTTGATCCC AACGACCTCA ACCTGCTTGT CAGTCTGGCG CGACAGACGC AACAGGCGCT TCCACGCGCC GCTCGCGATC CGGCGGTTCT TGCGCAGTTG AGTGAAACCG CCCGACAGAC GCTCACACGG CTTCAGACTA TCGTCGAAAC GCTGGAGAGA GAAGCGGATG TCTGGCACGC GCTGACGACC TATCTATTCG AGCAGAGTCA GGCGATGCGG CAACGGTTGA ACCGCGCTGC ACGGGGTGAG TATGCCGCAC AACGGGAACT TGCCACACTC GGTCAGTTGA TTGCGATTGC GCGCAACTTT GTGCGTCTTG CAACACCGGA GGAGAGCGGT GCGCCGCACT TCATCGCCTA CATTCGCGCA TTGCGCGCTG CCGGTGTGCA ACCACGACCG TTGATCGGCG GGCAGGCGGA TGCCGTGCGG GTCATGACCG TCCACGCTGC AAAGGGGCTG GAGTTTCCAA TTGTGTATGT ACCAGGATTG CAGGAGGGAC GCTTCCCGGC GCGGGGCAAT CAGCGTGGAT TGTCATTGCC TGCCGGTCTT ATTCGCGGTT CGATCGAGCC TGAAGACCAG GAGGAGCGCT ACCTTCTCTA CGTGGCGATG ACTCGCGCAC GTGACCGGTT GGTGCTCAGT CGCGCACTGA CGCGGGGCAA TGGCGAGAGA GCAGCGGAAC GTTCTTCGTT GTTACCCGGC GATGGTGACG GGAATGGCGC ACCCTGGATC GTTCGATCAG TCATCGGCGG GGCAACCTGT CCGAATCCAG CGCCTGCGAT GCGGCTGCAC GACACACCAG CGCCGCGTAT GCCGTTACCG GCTTCGAGTA TCGATCTCGA CGGTTGCAAA CGGCGCTTTC TGTATCAGTA CGTATATCAG TTGTACGACG ATCTTTCGCC GTTTTTACGT ATGCATCAGG CAATCCGCGA ATGCGTCAGG ACGCTGACGG AACAGGCGCG TGCGGGTGTT CTGCCTGCCG ATGACGATGC AGTACGATCG CTGGTATTCG GTCAGTTGCA GCGGTACGAA CTCGACACGG TGCTCTACGC CGAAGACTAT GCCACCGAGA CGTTACAGCA CGTTCAGGTG GTGTGGAATG ACCTGCGAAG CGGGCGAATC GCGCCTGAGC GGGTAGACCG GCGCGTGCTG GTGCGGCGAC CGGCTGGGGT GATCGAAGTG CGGATTGATC GAGAGGAGAC GCAGGACGGA GTGACGCGGT GGGTATGGGT GCGGCCCGGT GCGCCGCGTG GCAATGATCA TCTCTCGGAG CGTATGATCC TGTATGCGCT GGCGCGTCAG GAGGTGGGTC ATCCTCCTGA TGAACTTGCG ATTGCCTTTA CGGGAACAGG CGAGACAGTG CGGGTCACGC ACGCTGAGCG GGTACTGGCG AACCACACGG CAAAGATCGA CCGTCTGCTC GAAGCGATGC ACGAGCGGCG CTGGGAACCG TCGTTTGGTT CACAGTGCGA CACCTGCCCT TTCAACCTGA TCTGTCCGGT ATAA
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Protein sequence | MSVRRQQIRA AACDVRRSYY ERVGSDDLNH PLSLDTLVEE IWGLTVIRDV LAAGIQGKVE PEHDVIRVQR DLSPTRQRFV IAHEIGHVHL EGLDAGPFRD TDETLDECAA GADDETAVRS YNRRERREQE ANLFALELLV PAEELWQAVQ QADWSIESLA AQFAVSTDAI RAQLVNVCCL DPLTPPDGST VTRHTSFTPD PEQQAAVDAP LPLLLAAGPG TGKTRSIVAK YVSLVHQGVD PASILALTFS NRAAEEMRER IIAALRQAAP RLAGRVEIST FHSWGLNILR IYGARLGLPA DVRLLDTADL FLLLSKRLDD LRLAYFKDLR EPTRHLVTII QAISRIKDEL WSPEEFARAA EQEAERLIGQ AEQDHPGASR KATEARERAV RRATALRELA QIYPRYEAIL REAGALDYGD LIVLPVRALH DPAIAADLRR RYHYLLVDEF QDINYASGEL IRLLDGGRGR VWAVGDAWQS IYRFRGASAA NLDEFLHHYP TAQVRYLTRN YRSLQPILDA SAAVMVSDPR AATRPLLQAQ RTGGGHAVIE LVAPHSQDEH TAIAHDILRR ARSGRGRGLP RCAVQPWMLH CRKMRRALRR PPLFIRRWRF HDHAVLCRTH EQASAIAAVL EAHGIPVDHP GNVFEASEVK DVLAICAQIG STNSAGLLRA LTMPDHRLDP NDLNLLVSLA RQTQQALPRA ARDPAVLAQL SETARQTLTR LQTIVETLER EADVWHALTT YLFEQSQAMR QRLNRAARGE YAAQRELATL GQLIAIARNF VRLATPEESG APHFIAYIRA LRAAGVQPRP LIGGQADAVR VMTVHAAKGL EFPIVYVPGL QEGRFPARGN QRGLSLPAGL IRGSIEPEDQ EERYLLYVAM TRARDRLVLS RALTRGNGER AAERSSLLPG DGDGNGAPWI VRSVIGGATC PNPAPAMRLH DTPAPRMPLP ASSIDLDGCK RRFLYQYVYQ LYDDLSPFLR MHQAIRECVR TLTEQARAGV LPADDDAVRS LVFGQLQRYE LDTVLYAEDY ATETLQHVQV VWNDLRSGRI APERVDRRVL VRRPAGVIEV RIDREETQDG VTRWVWVRPG APRGNDHLSE RMILYALARQ EVGHPPDELA IAFTGTGETV RVTHAERVLA NHTAKIDRLL EAMHERRWEP SFGSQCDTCP FNLICPV
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