Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0046 |
Symbol | |
ID | 5206979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 52288 |
End bp | 53253 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640593680 |
Product | hypothetical protein |
Protein accession | YP_001274439 |
Protein GI | 148654234 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0958603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCAAT CCGCCTCGAT CATCGACACG CTGAGCGAAG GGTATCGCGC CATTCACCGG AGGCCGGCTG CGCTGCTGCT GGTGTTCGTC TTTAATCTGG CGCTTCTGAT CACAGCACCG GTCTCATTTG CGCCGCTTTT CAATCGCTTC GATAGTTTTC TGACCAGGCT GGCAGGCGCA TCGACGGACA CAAACAGCGA CACACAGGTT CAGATGAGTG CACTGCTGGC GGAGCTTGGT CAGACAGACC TGCGACAGAC GCTGGCGTTG ATGAACGTGA TGCCGCGGTT TGTTATTCCG CGGTTTGCGC CCGGTGCGCT GGCGACCGGC AGTATGAGCG CGGTGGTGAC CATCGCCAGT GTTCCGGAGG CGCTGCTCAC GTTCGTCCTG ATCAACCTGA TCGTCTTTCC GATCGGTATT CTGTTTCTCA CGCTGGTTGG TGCAGCAGTG CGTGGTGAGC CGGTGTTGCA CCGCGATTTC TGGCGCGTGC TGGTGCACAT TGGTGTGGCA GTCCTTGGGG TGATGGCAAT CCTCGCCGCA GCGTTCGTGC TGATCGGCAT ACCGTTCACC TTCGCGGCTG CCCTGCTGAT GGCGGTGAAT GAGGTGCTGG GCATCCTGGC GTTCAGCCTG ATCCTGGTAG TGATCATCTG GGTGCAGATT TATGTCGGTT TTGCCAACGA AGCGATTGTG ATGAGCCGGG TGGGACCGCT GCGCGCTATT CGGACGAGTT TCGAGGTGGT GCGCCGCAAC CTGTGGGGCG TCGTCGGTCT GTTGATCCTG TCCCTGATCA TTACCCGTGG AACCGAGGTG ATCTGGGAAA TGTTCGGCAA TTCGACAGCA GGCGGCATAG CGGCGGCGCT TGGCAGTGCG TACATCGGCG CCGGACTGGC GGCGGCGCGT ATGGCGTTCT ACCGTGAGCG CCTGCGTCGT CTGAGTGAGC AGCACCTGGT CCGACCAGGG GCATAA
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Protein sequence | MRQSASIIDT LSEGYRAIHR RPAALLLVFV FNLALLITAP VSFAPLFNRF DSFLTRLAGA STDTNSDTQV QMSALLAELG QTDLRQTLAL MNVMPRFVIP RFAPGALATG SMSAVVTIAS VPEALLTFVL INLIVFPIGI LFLTLVGAAV RGEPVLHRDF WRVLVHIGVA VLGVMAILAA AFVLIGIPFT FAAALLMAVN EVLGILAFSL ILVVIIWVQI YVGFANEAIV MSRVGPLRAI RTSFEVVRRN LWGVVGLLIL SLIITRGTEV IWEMFGNSTA GGIAAALGSA YIGAGLAAAR MAFYRERLRR LSEQHLVRPG A
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