| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0038 |
|---|
| Symbol | |
|---|
| ID | 5206971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 41856 |
|---|
| End bp | 42272 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640593672 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001274431 |
|---|
| Protein GI | 148654226 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.925783 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTACTCA TCATCCGAAC AGCGCAGCAT CGCTATATTG TGCGGCGGGA AGATGTGGCG
ACCCTGCGCG CTATGACGCG AGGCGACGAC GGGAGGCGGG AAGACGCCGA TCCTTCTGTG
ATCGCTGTGG AATTGGGACC GCTGATCGAT CCAGCCGATG TCAGCACGGT ACAGCGGCGG
CACGCATTGA TCATTCCCTT GCGACGGCGC AACATTGCGT TGCTGGTCGA TGCCGTGGAT
ACGATTGTCG AATATGCGGA CGTTCAACCG CTGCCGCCGT TGTTGCGCGA GCGGTTGCGT
GAACCCTGGA CGACCGGCGT CCTGCTGATC AATGACCAGC CTGTCGTGCA ACTCGATGTG
CGGGCGATTG CACGCAGCAT TTTGTTACAG CGAACACACG CTTCGGAACA GAAGTGA
|
|---|
| Protein sequence | MLLIIRTAQH RYIVRREDVA TLRAMTRGDD GRREDADPSV IAVELGPLID PADVSTVQRR
HALIIPLRRR NIALLVDAVD TIVEYADVQP LPPLLRERLR EPWTTGVLLI NDQPVVQLDV
RAIARSILLQ RTHASEQK
|
|---|
| |