Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0037 |
Symbol | |
ID | 5206970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 40342 |
End bp | 41847 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640593671 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001274430 |
Protein GI | 148654225 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.603836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.831641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGG CATCGAATCA TAAAATCTTT GCAAGCGTTA TCACCAATCC GCAGAGTCAC GACGAGGAAC GAGCCAGAGT ACTGACCCAT CTGACGATGG TGTTTGGCGG AGTTGCCGGT GTCGGCAGCA TACTGTTCAT CGTTCTCGCC CTGGTCGGCA TTATGCCGCT GCAGGCTGTC GGTGCAGCAG CCGGGGTCAT TGCGATGATC GCCGTGATCG TGGGTGGCAC GCTTGGCGCG TTGCGTCTCA GCACGGCGAC AGTCGCGTCA AATATTTTCT TGTACGGTTC ACTCTTCTAT GTTATCGGCA TGATCTACCT GGGTGGCGGA GTCACAGGTC CTGCCGGGAT AGCGTTTCTG TTTCCGGTGG TCGTGGCCGG GCTATTTGGA CGCGCTGCGG AAAGTCCTCG CCTGTTCGGC GTCGCATTGC TTGCCTACCT GCTTCTCGCC GTTGCCGAAA CCGTCGGCGT GGTGCAACCA CAGAACGATG TTCCCGGATT GCCGCGTACT GTGGCATTCG TCATCTTCTT CGCCAGCGTC GGTGGATTGC TCACCTATGT TGCATCGCTC TGGTCGACCA GCACCACGCG CTTCCTGGAG CAGACCCGTG CGCAGTCGGA AGAGTTGTAT GAAACCAACC AGCGTCTGAT CGAAAAAAAC ATCCAGCAGG TCGAACTGGG AAGCGAACTC TCGGCAGCCG CGACTGAACT GCTGCGCGCC TCGCACGAAC AGGCGAGCGG GGCTTCCGAG CAGGCAAGCG CCGTATCGCA GGTGAGCACG ACAATTGAAG AATTGGGTTC AACAGCGCGC CAGATCGCCA TCGCCGCCGA GCAGGTGGCG GAAGCGGCGC GGCAGACGCT CGAAAACCTG AGCGAGGGGC AGGAAGCCGT TGATAAAAGT ATTCAGGCGA TGGATCGCAT CCGCAGCCGC ATGCAGGATG TATCGGCGCG GGTGCTGAAT CTCGGCGAGC GGTCGCAGCA GATCGGCGAA ATCATCGACC TGATCAACGA TCTTTCGGAC GAGACCCATC TGCTTGCGCT CAACGCCGCC ATCGAAGCCG CCGGCGCAGG TGAGCATGGT CGCCGGTTCG CCGTGGTCGC CGCGGAAGTC AAAAGTCTGG CGAACCGCGC ACTGGTTGCT GCCAAAGAGG TCAAGGGCGT GATCGCTGAA ATCCAGCAGG CCACCAACGC TGCCGTGCTG GCGGCGGAGG AAGGCGGCAA AGAAGTGGCT GCCGGCGTCG AACTGGCGCA CAGCGCCGGT CAGGTGATGG ACGTGATTGT GATGGCGGCG GAGCGCACTG CCCAGAGCAG CGCCGAGATC AATCTGGCGA CTGCACAACA GCAGAGCGCC AGTGAGCAGG TGGTGGAAAC CATGCGCGAG ATCGCCGACG TGGCGCGTCG CACCGCTGCC GGTGCGCGTC AGGTGCAGGA CGCTGCCCAA CGTCTGACTG CGATTGCCAA TCGGCTGCAT GGACTTTCAC AGGATGGCGC GGGTCGGGTG GCCTGA
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Protein sequence | MEQASNHKIF ASVITNPQSH DEERARVLTH LTMVFGGVAG VGSILFIVLA LVGIMPLQAV GAAAGVIAMI AVIVGGTLGA LRLSTATVAS NIFLYGSLFY VIGMIYLGGG VTGPAGIAFL FPVVVAGLFG RAAESPRLFG VALLAYLLLA VAETVGVVQP QNDVPGLPRT VAFVIFFASV GGLLTYVASL WSTSTTRFLE QTRAQSEELY ETNQRLIEKN IQQVELGSEL SAAATELLRA SHEQASGASE QASAVSQVST TIEELGSTAR QIAIAAEQVA EAARQTLENL SEGQEAVDKS IQAMDRIRSR MQDVSARVLN LGERSQQIGE IIDLINDLSD ETHLLALNAA IEAAGAGEHG RRFAVVAAEV KSLANRALVA AKEVKGVIAE IQQATNAAVL AAEEGGKEVA AGVELAHSAG QVMDVIVMAA ERTAQSSAEI NLATAQQQSA SEQVVETMRE IADVARRTAA GARQVQDAAQ RLTAIANRLH GLSQDGAGRV A
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