| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0031 |
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| Symbol | |
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| ID | 5206964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 31829 |
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| End bp | 33397 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640593665 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001274424 |
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| Protein GI | 148654219 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.918489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCGA CAGAACCGCT CAATTTCATG CCGCTCGATC TGGACACGTT CAGCGGGAGC
GAGCGATTCA TGGCTGGAAC GCGCCTGGGC GCGGCGTTCG GTCAGGGTAT CCGCGCCTAC
CTGCGCGCTG ACTACGCCAA TGCGATCGAG CATTTCAAAG CCGCTTTGAT CGCTGCATAC
ATCGAAGGTG AAGAACGCGC TCAGATTTAT GATCGCGAAC GGGCGATCAT CTATCTGTAC
ATCGGCAATG CGCTGGCGTA TCAGGAGGAT TGGGAAGGGG CGCTGCGCGA GTATCTCGAA
GCCGTGCAGA CCGATCCGCA ACTGGCTGAG GCGCACTACA ACCTGGGGGT GGCATTTGCG
GCGCAGGGGC GGCTCGACCG CGCGATTGCC GCATTCAAGG AAGCCATCGA ACACAATCCG
CGCCTGTACG AGGCGCACTT CTCACTGGGA CGCTGCTATC AGCGCCTCGA TGATGCCGGT
CGCGCGTACA TTCACTACGA TCAGGCGTGT CAGGCGCGCC CGCAGGCCGC AGAGCCGCGC
TACTACATGG GATTGATGCA CCAGAGCCAC GGCGCGCACG AACTGGCGCA GCGTTGCTTT
GCCGAGGCGC TGCGCGTCGA GCCGACCTTC GTCTCGCCAG AATTGCAGGA CGAGGTGCTG
GTCAACCGCT CGGAAGAGGA AGTCGCCCAA TGGTACTACC GCCTCAGCAA CGATCTGAAA
CAGCAGGGGT ACGAGGAAGA GGCGGAACGG ATCTACCGCG CGCTGCTCCA GTGGCGTCCC
GAAGAACATT ATGCCCGTTA TCTGCTCGGC AATCTGCTGG CGCGCGCGCG GCGTCTCGAT
GAAGCGCTTG AAGCGTATGC CCAGATTCCG CCACAGGACA GATATTACGT CGATGCGCGC
ATTCGGATCA GCGCGATCCT CAAACTTCAG AACAAGATGC GCGAGGCGTA TGATACCCTG
TTCGAGTGCG CCAAACTGCA CCCGACCAAT GGTCAGTTGT TCCTGAATAT GGGTAAGTTG
CTCTACGATA TGAACAAACA CGCTGGCGCT GTCAAAGCGT TTGAGCGCGC CGTGCAACTG
CTCCCCAACG ATCCGCAGGC GCACTACCTG CTGGGGTTTA TGTACAACCT CATGGGACGC
GAGGGATGGG CGCTGGCAGC CTGGCGCAAG GCAGTGGAAC TCGCTCCGGA CGCGCATTCT
CTGCGCTACG ACCTTGGCTA CATGTACGTG CGACGCAACC GCTATGACCT GGCAGCAAAA
GAGTTTGCCC GCGTGCTCCA GTTCTGGCCC GATGATGTCG AGACGAACTT TATGCTCGGA
TTGTGCTACA AAGAACTGAT GGAACCGGCG CGAGCCATTC CGCTGTTTGA AAAAGTGCTG
CGTCGCAATC CGCGCCACGT GCAGGCGCTC TATTATCTCG GCGCTTCGTA CCTTCAGATT
GGCAATACAT CGCTTGGCAA GGCGTATCTC AGGCGCTACG ACTACCTGGC GAGCCAGGAA
CAGTCGAGTG CGCCTGTGAC GCGCCGGACC ATGCGCCAGC GCACTGTCGG CATGCTAGAG
TCGTCGTAA
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| Protein sequence | MSSTEPLNFM PLDLDTFSGS ERFMAGTRLG AAFGQGIRAY LRADYANAIE HFKAALIAAY
IEGEERAQIY DRERAIIYLY IGNALAYQED WEGALREYLE AVQTDPQLAE AHYNLGVAFA
AQGRLDRAIA AFKEAIEHNP RLYEAHFSLG RCYQRLDDAG RAYIHYDQAC QARPQAAEPR
YYMGLMHQSH GAHELAQRCF AEALRVEPTF VSPELQDEVL VNRSEEEVAQ WYYRLSNDLK
QQGYEEEAER IYRALLQWRP EEHYARYLLG NLLARARRLD EALEAYAQIP PQDRYYVDAR
IRISAILKLQ NKMREAYDTL FECAKLHPTN GQLFLNMGKL LYDMNKHAGA VKAFERAVQL
LPNDPQAHYL LGFMYNLMGR EGWALAAWRK AVELAPDAHS LRYDLGYMYV RRNRYDLAAK
EFARVLQFWP DDVETNFMLG LCYKELMEPA RAIPLFEKVL RRNPRHVQAL YYLGASYLQI
GNTSLGKAYL RRYDYLASQE QSSAPVTRRT MRQRTVGMLE SS
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