Gene RoseRS_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0028 
Symbol 
ID5206961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp29106 
End bp30236 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content58% 
IMG OID640593662 
Producthypothetical protein 
Protein accessionYP_001274421 
Protein GI148654216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.876353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGT TTACGGCAAT TCTTATGCTC TGCCTGAGCG CTCTGATCCT ACCGCAGGCT 
GTGTCTGCCA GCAATCAGGA GCGTTGCTTC CGCGAAACCG GTTACTGCAT CTCCGGACCG
ATTCTGCGTT ACTGGGAGCG AAACGGTGGT CTGAGCACCT TTGGTTTCCC GATCAGCAAT
CAGGGGATGC AGATGGCGGA GGATCGGATG TTGCAGGCGC AATGGTTTGA GCGTGATCGC
CTGGAGATCC AGGCGGATGG GCGAGTCACC GCCGGACGCC TTGGCGCGCG CTACCTGGAA
TTGCAGGACC GCCCCTGGCA GACATTCCCG ACCGTCGACC AGGCAGATCC GGGGTGCGCA
TATTTTGCCA TCACCCGTCA TCAGGTGTGC GAGCCATTCC TGACGTACTG GCGCACCCGC
GGCGGTCTGG AGCGGTTCGG ATATCCGATC ACCGAACGCA TACGCGAAGA GATTGAGGGC
AAGGTTTATG AGGTACAATA CTTTGAACGC CGACGGATGG AATTCCACCC TGAACTTGCT
GGCACCCCTT ATGAAGTGCT GTTGGGGCGG TTAGGGGTGG AAGTCATGCG CATCGACGGT
TGCGTTTCCC TTGAGCCGAT GTATGAACCG ACCGCTTACG CCTACCGGCG ATTGCTCGGA
TGTCCGATAG CATCGTCGCG TGAACTGGTC AGTCCGACCG GTCCGGTTCA ACTGAGGATG
CGCCCTGTAC CGCTTGCCGT TCAGCGTTTC GAGCGTGGCG TCATGCTATG GACGCGACGC
TGGGGCGACG TGCCGGTCCC CAGCGAAATC TTCGTTCTCA CCTCCAGTTC GACCGATCCG
CAACGTTTTA CCTGGCAGAT GTTCGCCGAC GAATGGACAG AAGGAACACC CATACGATTC
AGCGAAACGC CGCCTCCTGG ACGGTATGTG CCTGAACGTG GGTTTGGCTA TGTATGGGTG
CATAATGCGG AGGTGCGTTC GCGTTTGGGG TGGGCGATTG AACCGGAACA GGGCGAAACA
GGGGGACACC GGCAGTTTCA GCGTGGTTTT ATGATAACCC GCCCCTCAAA CGATACGGTG
TTCATCATTC TTGATGGGGG CGAAGCGCTC GTGGTACCGC GCAAGAACTG A
 
Protein sequence
MKRFTAILML CLSALILPQA VSASNQERCF RETGYCISGP ILRYWERNGG LSTFGFPISN 
QGMQMAEDRM LQAQWFERDR LEIQADGRVT AGRLGARYLE LQDRPWQTFP TVDQADPGCA
YFAITRHQVC EPFLTYWRTR GGLERFGYPI TERIREEIEG KVYEVQYFER RRMEFHPELA
GTPYEVLLGR LGVEVMRIDG CVSLEPMYEP TAYAYRRLLG CPIASSRELV SPTGPVQLRM
RPVPLAVQRF ERGVMLWTRR WGDVPVPSEI FVLTSSSTDP QRFTWQMFAD EWTEGTPIRF
SETPPPGRYV PERGFGYVWV HNAEVRSRLG WAIEPEQGET GGHRQFQRGF MITRPSNDTV
FIILDGGEAL VVPRKN