| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0023 |
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| Symbol | |
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| ID | 5206956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 22552 |
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| End bp | 24036 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640593657 |
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| Product | O-succinylbenzoate-CoA ligase |
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| Protein accession | YP_001274416 |
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| Protein GI | 148654211 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.692894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.83419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCCCG ACTGGCTCTC GGCTCAGGCG AAGGCGCGCC CCGACGGGGT GGCGCTGATC
GTCGGCGAGA CGATGCTGAC CTACAGAGCA CTGAACGAAC AGACGGCGCA GTTTGCTGCC
CGTCTGTTCG CGTGGGGCGT GTCGCGCGGC GATGTGGTGG GCATCCTGTT GCCAAACCGT
CTGGAAGCGG CGCTGGCGAT TCATGCCGCA GCACGTCTCG GAGTGACGCT GGCGCTGTTC
AACACCCGGC TCACACCGGT GGAACTCGAT ATGCAGGTGC GCAGTGCCGG ATGCTGCTTC
CTGCTCTGCG ACCGTGACAC CCTGCCGACA GCGCTGGCGC TGCCATCTGC GCCCCGACTG
CTGTGCGTCG ATCCGATTGA TGACCCACGC CTGACGCCGC TTGACCGGTT GACCGGCGAT
CCCGCAACGT TCCGTGAGGG TATGATCGAC CCCGACGCGC CTTTCGCAAT CATCTTCACA
TCGGGGACAA CCGGCAGTCC CAAGGGCGCA GTCCTGACCT GTGGCGCATT CTTCGCCAGC
GCGATGGCAT CAGCCTATCG TATCGGCGTG CTTCCCGATG ATCGATGGCT CTGCGTGCTG
CCGTTGTACC ACGTCGGCGG ACTCAGCATT CTTCTGCGAT CTTGCCTCTA CGGAACCGCC
GTTGATCTCT GGCAGCGCTT CGATGCCGCA GCCATTGCCC ATCGCATGAC AACCGCGCCG
GTGACGCTGA TCTCACTTGT GCCGACGATG CTCCACCGCC TGCTGGAACT GTTCGGCGAT
GAACCGCCGC CGCCACGCCT GCGACTCGTG CTGCTCGGCG GGGCTGCCGC GTCGCCCGAC
CTGCTGAAAC GCGCGTTACA GGCAGGATGG GCGCTTGCCA CAACCTATGG ATTGACCGAG
GCGGCATCGC AGGTCGCCAC AGCGCTGCCC GAACAGGTGC GGCGCAAACC CGGCAGCGTC
GGACGCCCGC TGCTATTCAC CAGCGTGCGT GTCGTCGATG AAGCAGGGCA TGATCAACCA
CCCGGAGTCT ACGGCGACAT TCTGATACGC GGACCGACCC TGATGCGCGG GTATCTCGGC
GAACCGCCGC TCGACGCTGG CGCCTGGTTT GCGACGGGAG ACATCGGCTA TCTCGATGCC
GACGGTGATC TGTGGGTCGT GCAGCGACGC AGCGATCTGA TCATCAGCGG CGGTGAGAAT
ATCTACCCGG CTGAGATCGA ACAGGTGCTG CGTCAGCATC CAGCCGTCGC CGATGTTGCG
GTTGTCGGCG TTCCTTCACC GGAGTGGGGG CAACAGGTCG GCGCTGTGCT CGTACTGCGC
GATCCAGCCG TGGACGTGCG CGAGATCCTG GCGTTCAGTC GCACCCGGCT GGCAGGCTAC
AAACAACCGC GCATCGTCCG GGTCGTTGAC GAGTTGCCGC GCACCGCGTC AGGGAAGATC
CACCGGGCGG CAGTGGCAGA ATTGCTGGAA GGGATGATAC ACTAA
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| Protein sequence | MMPDWLSAQA KARPDGVALI VGETMLTYRA LNEQTAQFAA RLFAWGVSRG DVVGILLPNR
LEAALAIHAA ARLGVTLALF NTRLTPVELD MQVRSAGCCF LLCDRDTLPT ALALPSAPRL
LCVDPIDDPR LTPLDRLTGD PATFREGMID PDAPFAIIFT SGTTGSPKGA VLTCGAFFAS
AMASAYRIGV LPDDRWLCVL PLYHVGGLSI LLRSCLYGTA VDLWQRFDAA AIAHRMTTAP
VTLISLVPTM LHRLLELFGD EPPPPRLRLV LLGGAAASPD LLKRALQAGW ALATTYGLTE
AASQVATALP EQVRRKPGSV GRPLLFTSVR VVDEAGHDQP PGVYGDILIR GPTLMRGYLG
EPPLDAGAWF ATGDIGYLDA DGDLWVVQRR SDLIISGGEN IYPAEIEQVL RQHPAVADVA
VVGVPSPEWG QQVGAVLVLR DPAVDVREIL AFSRTRLAGY KQPRIVRVVD ELPRTASGKI
HRAAVAELLE GMIH
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