Gene RoseRS_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0007 
Symbol 
ID5206940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp7768 
End bp8286 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content59% 
IMG OID640593641 
Producthypothetical protein 
Protein accessionYP_001274400 
Protein GI148654195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0351205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATGG CAAAGTTCAC GTATGATCTC GACCCGGTGA CGCGCATTAC GGCAAGCGCA 
GTTGGTCCGC CGGGGCAGCG CGTCTTCTAC ATCCAGGCGC GCCGTGGGCG CGAACTGGTT
TCACTCATTG CGGAGAAGGA ACAGGTTCGG GCGCTTGCTC AGGCAATCGA TCGCCTGCTC
GAAGAACTGG CAGAGAAGAA TCCGCTCCTC TCTTCTTCCG ACGATCTGCT TCTGGCGAGC
GATATGAACC TGGAAGAACC GATCGAACCG CGTTTTCGTA TTGCTCAGAT GGGGATCGGG
TACGATGCTG AACGCGATAT GGTCATTCTG GTGATGCAGG GGTACCGTGA GGACGGCGAA
GATGATGAGC CGCCGACGGC ACGTTTCGGT GCATCGCGTC AGCAAATGCG CGCTTTGAGT
GAACACGCGG CGAGCGTGGT TGCCCGTGGG CGAAAGATCT GCGGCAACTG TGGCCGTCCA
ATCGATCCCG GCGGTCACTT CTGCCCGCAA ATGAATTGA
 
Protein sequence
MAMAKFTYDL DPVTRITASA VGPPGQRVFY IQARRGRELV SLIAEKEQVR ALAQAIDRLL 
EELAEKNPLL SSSDDLLLAS DMNLEEPIEP RFRIAQMGIG YDAERDMVIL VMQGYREDGE
DDEPPTARFG ASRQQMRALS EHAASVVARG RKICGNCGRP IDPGGHFCPQ MN