Gene PsycPRwf_2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2399 
Symbol 
ID5204457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009516 
Strand+ 
Start bp8779 
End bp9417 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content40% 
IMG OID640593627 
ProductSel1 domain-containing protein 
Protein accessionYP_001274376 
Protein GI148641532 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA GACTAGCAGT ATTTTTGCTG ACGTGTATTA TGCTGACAGG GTGTACTAAA 
GTTATTGATA CTCAGAGGGA GAGCACTCAA AACAATGTTC CAACCGTAAA ATCTGATGTT 
GAGAAGGATT TTGAAAATCT CACATTACAA GCTAATCTAG GAGATGCTTC AAGCCAAGCG 
GAATTAGGGC TTATATACTA CTATGGTAGA GGCGTTCCTC AAGATTATTC AAAAGCATTT 
TATTGGTTAC AACAAGCAGC TAACCATGGA CATAAAGAAA TGCAGGGGAT GCTGGCATTG 
ATGTATGAGA AGGGTCAAGG CGTAGATCAA AACGATGCTA AAGCGTTTGA GTTATATCAA 
AACTTAGCCA ATGACGGTAT TGACTTATAC CAATCAAAAA TTGGAGATAT GTACCTTAAA 
GGTAAAGGTA CAACCCAAAG TGATACGAAG GCTTTTGAGT GGACGCGCAA GGCAGCTTTG 
CAGGATCTTC CAATGGCTCA ATCAGGGCTG GCAGTATTCT ATGAGAAGGG TATCAATATA 
CAGCAGGATA AAAACAAAGC GCTAGAATGG TATCAAAAGT CTTGCAGCAA TGGATATCCG 
TTTGCCTGTG CTGAGTATCG AAGACTTTAT CAAAAATAG
 
Protein sequence
MKKRLAVFLL TCIMLTGCTK VIDTQRESTQ NNVPTVKSDV EKDFENLTLQ ANLGDASSQA 
ELGLIYYYGR GVPQDYSKAF YWLQQAANHG HKEMQGMLAL MYEKGQGVDQ NDAKAFELYQ 
NLANDGIDLY QSKIGDMYLK GKGTTQSDTK AFEWTRKAAL QDLPMAQSGL AVFYEKGINI 
QQDKNKALEW YQKSCSNGYP FACAEYRRLY QK