| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2392 |
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| Symbol | |
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| ID | 5204468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009516 |
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| Strand | - |
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| Start bp | 634 |
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| End bp | 1863 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640593621 |
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| Product | plasmid replicase |
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| Protein accession | YP_001274370 |
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| Protein GI | 148641526 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000895124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATGTC TCAAACAAGT CTCGCCAAGA GAATGGCAGA AAGTACCTCA ATTACGTCAG
TTTTATGACG ACCTCGCCAA TAAGCCTTAT TGCACCAACG AGAAAGGCTC TATTTTCGTT
CGTAGCAAAA AACAAGCGAT TAAACACCGA TTTATTCAGC CCAATCACCC TTGTGTGATT
AAGTGGTTAG TATTTGATAT TGACCATCCA GATGCCTTAT TTACCTTTAT AGATACAGGC
CTACCCAAAC CCCAAGTTAT AATCAAAAAT CCCAAAAACG GCCACGCCCA CTATGCGTAT
AGGCTAACCA CACCTGTAGG TATTGGAGGT AACTCAAGTA CTAAAGCCGA AAGCTATCTT
AGAGCTGTAA AAGATGCCCT ATGTGAAGCA TTAGGAGCAG ATACGAGCTA TTCAGGCAAC
CTCATCAAGA ACCCTTGTTA CATAAAAGAC AATGCACCCA CCCCAAAAAA GACTCACTGG
CTTAACAACA ATGAGGACGA AGGCGATCGT GACGAGCATG AGACGTATCT AACAGGGGCG
CAGCCCTCTT ATACGCTTGC AGAGCTTGCA GATTATCTAG ATTTAGAGCC ACTCTACCCT
CAGACGAAGC AAGAGCCTGC AAATGATTCA GGTTATGGCC GTAACTGCTC GTTATTTGAG
GAGTTACGAC ACTTAGCCTA TCAGTGTAAA ACTAAAAGTT TTAATGCAAT AGTCAGATAT
CTTAAACCAA TAGCAGAAAA GATGAACCAG AGATTTGATG TACCACTTAA TCCAAATGAG
GTTAAGCACA TCATACGTAG TATCGCTAGG TATTGTGCCA GAATGGACTT CACAGCATCA
CATAAGGCGT TCTCTAAGCT TCAAGCTACT AGAGGTGCTA AAGGTGGCCG AGCTAAAGGT
AGGAGCTATG ATGAGAAACG ACAGCAAGCT AAAGAGTTAT ACGAACAAGG CTTAAATAAG
AGTGAAATAG CACGAAAGCT AGATGTATCA AGGCGTTCAG TCATCAATTG GCTGAGCAAC
CTAGAGTGTG CAAATAGCCA TAATCAGATA ATAGCCGCTT TGGGTGCTGG TTTGCAATTT
GCGATGCCGC GGTCACTGGT TCGGACTATT AAATCGTCTT CTTGTCCTCT AGCGGCTCCC
TATAGTGTAG CCTCTTCACT TCCTTCTGTT GTTATTGTGC GGAATTTTAC TCGCTTGGCT
GTGAATTCTG TTTTCCGGCC ACCGCCTTAG
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| Protein sequence | MECLKQVSPR EWQKVPQLRQ FYDDLANKPY CTNEKGSIFV RSKKQAIKHR FIQPNHPCVI
KWLVFDIDHP DALFTFIDTG LPKPQVIIKN PKNGHAHYAY RLTTPVGIGG NSSTKAESYL
RAVKDALCEA LGADTSYSGN LIKNPCYIKD NAPTPKKTHW LNNNEDEGDR DEHETYLTGA
QPSYTLAELA DYLDLEPLYP QTKQEPANDS GYGRNCSLFE ELRHLAYQCK TKSFNAIVRY
LKPIAEKMNQ RFDVPLNPNE VKHIIRSIAR YCARMDFTAS HKAFSKLQAT RGAKGGRAKG
RSYDEKRQQA KELYEQGLNK SEIARKLDVS RRSVINWLSN LECANSHNQI IAALGAGLQF
AMPRSLVRTI KSSSCPLAAP YSVASSLPSV VIVRNFTRLA VNSVFRPPP
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