Gene Lreu_R0025 details

Gene Information

• Locus tag: Lreu_R0025
• ID: 5188953
• Type: rRNA
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: +
• Start bp: 626353
• End bp: 629277
• Gene Length: 2925 bp
• GC content: 52%
• IMG OID: 640590376
• Product: 23S ribosomal RNA

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.610781
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

AGGTTAAGTT ATGAAGGGCG CATGGTGAAT GCCTTGGTAC TAGGAGCCGA TGAAGGACGG 
GACTAACACC GATATGCTTC GGGGAGCGGT AAGTACGCTT TGATCCGGAG ATTTCCGAAT 
GGGGCAACCC AATCAGCTTA GTCGCTGATT ACTTGACTAG TGAATACATA GCTAGCAAGA 
GGTAGACGCA GTGAACTGAA ACATCTTAGT AGCTGCAGGA AGAGAAAGAA ACATCGATTC 
CCTGAGTAGC GGCGAGCGAA AAGGGAAGAG CCCAAACCAA CAAGCTTGCT TGTTGGGGTT 
GTAGGACTGA ACATTAGAGT TACCAAAGTG CGACGTAGTC GCAACAGTTG GGAAGCTGTG 
CCATAGAGGG TGAAAGCCCC GTAGACGAAA CGTCACACTC TCTGTTCAGG ATCCTGAGTA 
CGGCGGGACA CGTGAAACCC CGTCGGAACC CGCGAGGACC ATCTCGCAAG GCTAAATACT 
CCCTAGTGAC CGATAGTGAA CCAGTACCGT GAGGGAAAGG TGAAAAGCAC CCCGGAAGGG 
GAGTGAAATA GTTCCTGAAA CCATGTGCCT ACAAGCTGTC GGAGCCCGTT AATGGGTGAC 
GGCGTGCCTC TTGCAGAATG AACCGGCGAG TTACGATTGC ATGCAAGGTT AAGGTGGAAA 
AACCGGAGCC GTAGCGAAAG CGAGTCTTAA ATGGGCGTAA GAAGTATGTA GTTGTAGACC 
CGAAATCAGG TGACCTACCC ATGTCCAGGT TGAAGGTGCG GTAAAGCGCA CTGGAGGACC 
GAACCCGTGT CAGTTGAAAA TGGCTGGGAT GAGGTGTGGG TAGCGGTGAA ATTCCAAACG 
AACTTGGAGA TAGCTGGTTC TCTCCGAAAT CTCTTTAGGG GGAGCCTTGA GGTAAAGAAT 
CGTGGAGGTA GAGCTACTGT TTGGACAAGG GGCCCGTCAT GGGTTACCAA CTTCAGATAA 
ACTCCGAATG CCATCGATTT ATACTCAGGA GTCAGACGAT GAGTGATAAG ATCCACCGTC 
GAAAGGGGAA CAGCCCAGAT CACCAGTTAA GGTCCCTAAA TATATGCTAA GTGGAAAAGG 
ATGTGGAGTT GCATAGACAA CTAGGATGTT GGCTTAGAAG CAGCCACCAT TTAAAGAGTG 
CGTAATAGCT CACTAGTCGA GTGATCCTGC GCCGAAAATG TACCGGGGCT AAGCATATTA 
CCGAAACTGT GGATGTGCAC TATGTGCACG TGATAGGAGA GCGTTCTAAG GGCGGCGAAG 
TCAGACCGTG AGGACTGGTG GAGCGCTTAG AAGTGAGAAT GCCGGTATGA GTAGCGAAAG 
ACAGGTGAGA ATCCTGTCCA CCGAATGACT AAGGTTTCCT GGGGAAGGCT CGTCCTCCCA 
GGGTAAGTCG GGACCTAAGC CGAGGCCGAG AGGCGTAGGC GATGGATAAC AGGTTGAGAT 
TCCTGTACCA GTTAACTGCG TTTGACGATG GAGGGACGCA GGAGGCTAAG CAAACCGTAC 
GACTGGAAGA GTACGGCCAA GCAGTAAGTC AGGATGTGAG TCAAATGTTT ACATCCGCGT 
TGACAAGCTG TGATGGGGAG CGAAATTAAA GTAGCGAAGT TGCCGATGTC ACACTGCCGA 
GAAAAGCTTC TAAGGAGTAG TTAACTGCCC GTACCGCAAA CCGACACAGG TAGTCGAGGA 
GAGAATCCTA AGGTGAGCGA GAGAACTCTC GTTAAGGAAC TCGGCAAAAT GACCCCGTAA 
CTTCGGGAGA AGGGGTGCTG GCCGCAAGGC TAGCCGCAGT GAATAGGCCC AGGCGACTGT 
TTATCAAAAA CACAGGTTTC TGCAAAATCG TAAGATGAAG TATAGGGGCT GACGCCTGCC 
CGGTGCTGGA AGGTTAAAAG GATGGGTTAG CTTCGGCGAA GCTCAGAATT GAAGCCCCAG 
TAAACGGCGG CCGTAACTAT AACGGTCCTA AGGTAGCGAA ATTCCTTGTC GGGTAAGTTC 
CGACCCGCAC GAAAGGCGTA ACGATCTGGG CGCTGTCTCA ACGAGAGACT CGGTGAAATT 
GAAATCCCTG TGAAGATGCA GGGTACCCGC GACAGGACGG AAAGACCCCA TGGAGCTTTA 
CTGTAGCTTG ATATTGAGTG TTTGTACTGC TTGTACAGGA TAGGTAGGAG CCGTAGAAGT 
CGGGACGCTA GTTTCGACAG AGGCGCTGGT GGGATACTAC CCTTGCAATA TGACCACTCT 
AACCCGCAGC ACTGAACGTG CTGGGAGACA GTGTCAGGTG GGCAGTTTGA CTGGGGCGGT 
CGCCTCCTAA AAGGTAACGG AGGCGCCCAA AGGTTCGCTC AGTATGGTTG GAAATCATGC 
GCAGAGTGTA AAGGCACAAG CGAGCTTGAC TGCGAGACAG ACAGGTCGAG CAGGGACGAA 
AGTCGGGCTT AGTGATCCGG TGGTTCCGTA TGGAAGGGCC ATCGCTCAAC GGATAAAAGC 
TACCCTGGGG ATAACAGGCT TATCTCCCCC AAGAGTCCAC ATCGACGGGG AGGTTTGGCA 
CCTCGATGTC GGCTCATCGC ATCCTGGGGC TGTAGTCGGT CCCAAGGGTT GGGCTGTTCG 
CCCATTAAAG CGGTACGCGA GCTGGGTTCA GAACGTCGTG AGACAGTTCG GTCCCTATCC 
GTCGCGGGCG TAGGAAATTT GAGAGGACCT GTCCTTAGTA CGAGAGGACC GGGATGGACA 
TACCGCTGGT GTACCAGTTG TTCCGCCAGG AGCACCGCTG GGTAGCTATG TATGGACGAG 
ATAAACGCTG AAAGCATCTA AGTGTGAAAC TCGCCTCGAG ATGAGATTTC CCATTTCCTT 
CGGGAAAGTA AGACCCCTCA GAGATGATGA GGTAGATAGG ATGGAAGTGG AAGTGCCGTG 
AGGCATGGAG CGGACCATTA CTAATCGGTC GAGGACTTAA CCAAG 

 

Protein sequence