| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1942 |
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| Symbol | |
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| ID | 5189545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1998040 |
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| End bp | 1998831 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640591780 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001272511 |
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| Protein GI | 148545141 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000307817 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTAA CCCTATTTTT AGCTGCTTGC TCCAATAAGC CAATTACTAG TCATAGTACT
GGTATCTGGG ACCACTACAT TATCTATAAC TGTTCACAAT TTATCATTTG GTTATCAAAG
CACTTTGGCG GATATGGAAT GGGGATCATT ATCTTTACGA TCATCATCCG GATCATCTTA
CTGCCATTGA TGTTCTACCA AACAAAGACC ATGATGAAGA CGCAAGAACT TGCTCCTCAA
CTAAAGGCAA TTCAGAAAAA GTACTCATCA CGTGATCGCG AGTCAATGCA AAAGATGCAA
ATGGAAACGC AGAAGCTCTA TAAAGAAGCA GGAGTTAATC CATGGGCTTC GATGCTTCCG
TTACTGGTTC AGTTACCAGT TATGTGGGCT CTTTATCAAG CAATCTGGCG GACCTCAGCC
TTACGGAATG GAACTTTCTT GTGGCTTCAG TTAGGTCACC CGGACCCATA CTACATCATG
CCTATTCTAG CGGCATTATT TACGTTCATT AGTTCATGGT TATCCATGGC TTCAATGCCC
GAAAAAAACT CAATGACAAC TACAATGACG TGGTTTATGC CGATTATGGT ATTCTTCATG
GCATTGGGAT TCTCTTCAGC TATTACCTTA TACTGGGTAG TAACAAATGC CTTCCAAGTT
GTCCAAACGC TTATCATTCA GAATCCATTT AAGATTCGTC GTGAACGTGA AGAAAAGCAA
CGGGCTGAAA AAGCAAAACG TCGCAAGATT GAAAAAGCAA AACGTCGCGC TTACCAAAGT
CGGCGGAAAT AA
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| Protein sequence | MSLTLFLAAC SNKPITSHST GIWDHYIIYN CSQFIIWLSK HFGGYGMGII IFTIIIRIIL
LPLMFYQTKT MMKTQELAPQ LKAIQKKYSS RDRESMQKMQ METQKLYKEA GVNPWASMLP
LLVQLPVMWA LYQAIWRTSA LRNGTFLWLQ LGHPDPYYIM PILAALFTFI SSWLSMASMP
EKNSMTTTMT WFMPIMVFFM ALGFSSAITL YWVVTNAFQV VQTLIIQNPF KIRREREEKQ
RAEKAKRRKI EKAKRRAYQS RRK
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