Gene Lreu_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1930 
Symbol 
ID5189996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1982149 
End bp1982841 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content35% 
IMG OID640591768 
ProductAzlC family protein 
Protein accessionYP_001272499 
Protein GI148545129 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID[TIGR00346] 4-azaleucine resistance probable transporter AzlC 


Plasmid Coverage information

Num covering plasmid clones88 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGG AAGTACGTTA CGCTTTTCAA AAAACTAGTC CGGTAATGCT TGGCTTTTTA 
TTTTTAGGCG CCAGCTATGG GATATATATG CATAAACTGG GCTTTAATTT TTTATATCCG
TTATTAATGG CTGCGACCAT TTTTGCTGGA TCAGTCGAAT TTGTAATTGG TAATCTTTTA
GTCCAGAGTT TTCAGCCATT GACTGTTCTT ATTTTAACTG CCCTTGTTAA TTCACGACAT
ATTTTTTATG GCATTACGAT GTTAAAAAAA TATTCCAATA CGGGAAAGTT AAAGCCGATT
CTTATTTTCG GAATGTGTGA TGAGTCTTTT TCCTTAAATG CAACGTTAAA AGCACCAGCT
GGCCTCGATC GCTCATATGT TTATTTTTAC ATAACCGCGT TCAACTATTT TAGTTGGGTA
GCTGGTGCAG GTTTAGGTGG TCTCCTTGGG GGAATGATTA ACTTAAACTT AGCAGGTTTA
GATTTTGTAA TGACGGCGCT TTTCATTGTT TTGTTTACAG AACAGTTGAA AAATGCCCGA
ACTCAGCGTG ATGCTCTGAT TGGTTTAGTA TTTGCAATTA TTTGTTTACT ATTTTGCAAC
AAGAATGCTT TCCTATTAGT GACATTAGTA ACGCTTGTCG CGCTATTTTC ATTAAATTAC
TTAATTACGA GGAGAAAAAA TGACATTAAC TGA
 
Protein sequence
MRKEVRYAFQ KTSPVMLGFL FLGASYGIYM HKLGFNFLYP LLMAATIFAG SVEFVIGNLL 
VQSFQPLTVL ILTALVNSRH IFYGITMLKK YSNTGKLKPI LIFGMCDESF SLNATLKAPA
GLDRSYVYFY ITAFNYFSWV AGAGLGGLLG GMINLNLAGL DFVMTALFIV LFTEQLKNAR
TQRDALIGLV FAIICLLFCN KNAFLLVTLV TLVALFSLNY LITRRKNDIN