Gene Lreu_1927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1927 
Symbol 
ID5189563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp1980187 
End bp1980819 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content38% 
IMG OID640591765 
Producthypothetical protein 
Protein accessionYP_001272496 
Protein GI148545126 
COG category[S] Function unknown 
COG ID[COG4832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTATA ATTTCAGAAA AGAGCAGAAA GAATTATATG TCCCTGGAAA GAATCCTAGC 
TTAATCAATG TACCAGCGAT GAAGTATCTT ACTGTGCGAG GACATGGGGA TCCTAATCAG 
GAAAATAGTG AGTATAAAAA AGCAATTGAA AAGCTCTACG CTGTTGCTTA TACCATTAAA 
ATGAGCAAAA AAGGCACCTA CCAAATTCCA GATTATTTTG ATTTTGTTGT TCCCCCACTA 
GAAGGACTAT GGTGGCAAGA TGGTATCACT GGAATTGACT ACGCTCACAA AGAAATGTTC 
AATTTCATTG CAATGATTCG CCTTCCCGAC TTTGTTACTC AAGACGTTTT TGACTGGGCA 
ATTCAAGAGG CTAGCGAAAA AAAGCAACTT GATTTACATA ACGTAGAATT CCTGTCAATG 
CAAGAAGGCC TCTGTGTGCA AGCACTTCAT ATCGGGTCAT ATGATGATGA ACCAGCAACG 
ATCGACAAAA TACATAAGTT TATTGAGGAA CATGGTTTAC AAGTAGATAT TAACGATGAT 
CGCCACCATC ATGAAATTTA TTTATCAGAT CCCCGGCGGA CGAAGGTTGA AAATCTAAAA 
ACGGTATTGC GTATTCCGGT AAAAAACAAT TAA
 
Protein sequence
MAYNFRKEQK ELYVPGKNPS LINVPAMKYL TVRGHGDPNQ ENSEYKKAIE KLYAVAYTIK 
MSKKGTYQIP DYFDFVVPPL EGLWWQDGIT GIDYAHKEMF NFIAMIRLPD FVTQDVFDWA 
IQEASEKKQL DLHNVEFLSM QEGLCVQALH IGSYDDEPAT IDKIHKFIEE HGLQVDINDD 
RHHHEIYLSD PRRTKVENLK TVLRIPVKNN