Gene Lreu_1926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1926 
Symbol 
ID5190028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp1979517 
End bp1980167 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content41% 
IMG OID640591764 
ProductMgtC/SapB transporter 
Protein accessionYP_001272495 
Protein GI148545125 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones85 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATGG CTGCCTTGTG CGGTGGAATC ATTGGGTTTG AGCGAAAAAG CAAGGCTAAA 
ATGGCGGGAA TTCGGACCCA TGCCTTAATT GCGGTAGGGG CAGCAATGGT CATGATTATT 
TCTAAGTATG GCTTTTTTGA TTTACTGAAA GTTACCCATA GTAATTGGAA CGTCGACCCA 
TCACGGATTG CCGCTCAAGT TGTTAGCGGG ATTGGTTTTT TAGGCGCTGG GACAATCATT 
AATCGTCATG ATCAAATAAT TGATGGCTTA ACCACGGCAG CTGGAATTTG GGTTACCGGC 
GCAATCGGTC TTGCCTATGG TAGTGGTTTA TACAGTATTG GGATTATCGG CACCTGTTGC 
GTTCTTTTAG CAGAAGTTAT CGGAAAATAT CTAGATCAGT TTGCACTCAG ACAAGGTAAA 
GGATTTTCCT GCTTTATTCA ATTAGAAGGA AATACTGATG ATTTGCATGC ACTTATCACT 
CAGTTAAACA AAAAATATTT TGAAGTTCCG CTCAAATATT CGATCTATGA TTATGGAGAC 
GGAAAAATCT CCTGTCAACT TTATGGTGAA TTAAGATCTG GCTTCAAAGC AGAAAACGTC 
TTTACCGATC TCACTGCGCT AGGCAACATT AAAAAAGTTG AGCTAGAATA A
 
Protein sequence
MLMAALCGGI IGFERKSKAK MAGIRTHALI AVGAAMVMII SKYGFFDLLK VTHSNWNVDP 
SRIAAQVVSG IGFLGAGTII NRHDQIIDGL TTAAGIWVTG AIGLAYGSGL YSIGIIGTCC 
VLLAEVIGKY LDQFALRQGK GFSCFIQLEG NTDDLHALIT QLNKKYFEVP LKYSIYDYGD 
GKISCQLYGE LRSGFKAENV FTDLTALGNI KKVELE